Alligator mississippiensis (American alligator): 102575875
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Entry
102575875 CDS
T03087
Symbol
SOX2
Name
(RefSeq) SRY-box 2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102575875 (SOX2)
Transcription factors [BR:
amj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102575875 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102575875
NCBI-ProteinID:
XP_006277242
LinkDB
All DBs
Position
Un
AA seq
315 aa
AA seq
DB search
MYNMMETELKPPAPQPASGGGTGNSNSAAPNQKNSPDRVKRPMNAFMVWSRGQRRKMAQE
NPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKK
DKYTLPGGLLAPGTNSMTTGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQDQLGYPQ
HPGLNAHNAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALGSMGS
VVKTESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAP
VPGTAINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggaaaccgagctcaagccgcccgccccccagcccgcctcgggaggc
ggcacgggcaactccaactcggccgctcccaaccagaagaacagcccggaccgggtcaag
cgccccatgaacgccttcatggtctggtcccggggccagcggcggaaaatggcccaggag
aaccccaagatgcacaactcggagatcagcaagcggctcggggccgagtggaaactttta
tccgaggcggagaagagacccttcatcgatgaagccaagcggctccgcgctctgcacatg
aaggagcacccggattataaataccgaccccggcggaaaaccaagaccctgatgaagaag
gataagtacacgttgccagggggcttgctggcgccgggcaccaatagcatgaccaccggg
gtcggggttggggccaccttgggagctggggtgaaccagaggatggacagttatgctcac
atgaacggctggaccaacggagggtatgggatgatgcaagatcagctcggctacccccag
cacccgggcttgaacgcgcacaacgcggctcagatgcagcccatgcaccgctacgacgtg
agcgccctgcagtacaactccatgaccagctcgcagacctatatgaacggatcgcccacc
tacagcatgtcttactcccagcaagggaccccgggcatggccctgggctccatgggctct
gtggtcaagacggaatccagctccagccccccagtagttacttcctcttcccattccagg
gctccttgccaagctggggaccttcgggacatgatcagcatgtatctaccaggtgctgaa
gtaccagaaccagctgccccaagcagacttcatatgtcccaacactaccagagtgcacct
gttcctggcacagccattaatggcacacttcctctatcacatatgtaa
DBGET
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