Alligator mississippiensis (American alligator): 102575902
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Entry
102575902 CDS
T03087
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102575902 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102575902 (SMARCD1)
03036 Chromosome and associated proteins [BR:
amj03036
]
102575902 (SMARCD1)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102575902 (SMARCD1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102575902 (SMARCD1)
PBAF complex
102575902 (SMARCD1)
GBAF(ncBAF) complex
102575902 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
102575902
NCBI-ProteinID:
XP_006264700
UniProt:
A0A151MRP9
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All DBs
Position
Un
AA seq
440 aa
AA seq
DB search
MGPPGYGGSPAVRPGMAQAGLDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQ
RIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKS
DAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHL
VEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVI
IQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINH
VISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLK
TQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYF
YSKVQQRRQELEQALGIRNT
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcccggctacggcgggagccccgcggtgcggcccggcatggcccaggccggc
ctggaccagtcgcgcaagcgcccggcgccgcagcagatccagcaggtgcagcagcaggcc
gtgcagaaccgcaaccacaacgctaagaagaagaaaatggctgacaaaattctacctcag
aggattcgtgagctggtacccgaatctcaggcctacatggatctgctggcatttgaaagg
aaactggaccagacgatcatgaggaaacggttggatatccaggaggccttgaaacgaccc
attaagcaaaaacgaaagcttcgcatcttcatttccaacactttcaatccggccaagtcg
gatgcagaggatggtgaggggactgttgcctcgtgggagctcagggtggaaggacgtctg
ctagaggattcagctctgtccaaatatgatgccaccaaacagaaaaggaagttttcatcc
ttctttaagtctctggtcatcgagctggataaagacctgtatggcccagacaatcacttg
gtggagtggcacaggactgctactacccaggagacggatggcttccaggtgaagaggcct
ggtgatgtgaatgtgcgctgcactgtcctcctgatgctggactaccagcctccacagttc
aagctggacccccgcctggcccgtctcttggggatacacacccagacccgcccggtgatc
attcaggcactgtggcagtatatcaagacccacaaactgcaggacccccatgaacgggag
tatgtcatctgtgacaagtacctccagcagatatttgagtctcaacgaatgaagttctca
gagatcccccaaagactgcatgctttgctcatgcctccagagccaattatcattaaccat
gtgatcagtgttgacccaaatgaccagaagaaaacagcctgctatgacattgatgtggaa
gtggacgataccctgaaaacccagatgaattccttcctgctgtccacagccagtcaacag
gagattgctgctctggataacaagatccatgaaacaatagaaaccattaaccagctgaag
acccagcgggagttcatgctcagctttgcccgggacccccagggcttcatcaatgactgg
cttcagtcacaatgccgggatctaaagaccatgactgacgtcgttggaaatccagaagag
gagcgtagagctgagttctacttccagccgtgggctcaggaagctgtgtgcagatacttc
tactccaaggtgcagcagagacggcaggagctggagcaggccctaggaatccgtaacaca
tag
DBGET
integrated database retrieval system
