Alligator mississippiensis (American alligator): 102575920
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Entry
102575920 CDS
T03087
Symbol
TTC30B, TTC30A
Name
(RefSeq) tetratricopeptide repeat domain 30B
KO
K19683
tetratricopeptide repeat protein 30
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102575920 (TTC30B)
Cilium and associated proteins [BR:
amj03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
102575920 (TTC30B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_19
TPR_1
ANAPC3
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_6
TPR_4
TPR_Slam
TPR_7
ARM_TT21_C
TPR_9
DASH_Dad2
DUF285
Ribosomal_S16
TPR_11
Motif
Other DBs
NCBI-GeneID:
102575920
NCBI-ProteinID:
XP_006271151
LinkDB
All DBs
Position
Un
AA seq
671 aa
AA seq
DB search
MAMAMAMPAPIADGEYTAVIYGLIRAGRYTTAAAILSSELQRSCRSRAGLSLLGYCYYQL
QDFAAAAECYEQLVALHPELDEYRLYQAQALYKAGLYGEALRAASPLLDVPAYQGRAFRL
QAATHYAQGDLPAAKSLVEQVLTAAAEGAAGGSDGSWEVPEAEVNLGCLLYREGRHEEAC
SKFAGAMQVLGYSPELSYNMALCCYAAKQYDLAVKHISEIIERGMRQHPELSIGMTTEGI
DVRSVGNTLLLHRTALVEAFNLKAAIEYQLRHLEAAQEALTDMPPRAEKELDPVTLHNQA
LMNMDSRPTEGFEKLQFLLQQNPCPPETFGNLLLLYCKHQYYDLAADVLAENAHLTYKLL
TPYLYNFLDAMITCQTAPEEAFHKLDELAGTLTEQLRNLAKQGQEARQNRDAEAINKSVS
EYDETLEKYVPVLMAQAKIYWDMENYTMVEKIFRKSVEFCNEHEVWKLNVAHVLFMQENK
YKEAIGFYEPIVKKHYDNILQVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYD
DPDKKIYHLCIVNLVIGTLYCAKGNYDFGISRVIKSLEPYNKKLGTDTWYYAKRCFLSLL
ENMSKQMIMLRDNVIQECVQFLEQCELYGRNIPAVIEQPLEEERLHSGKNTVTYEARHLR
ALMYEVIGWNM
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggctatggcgatgccggcgccgatcgcggacggggagtacacggccgtcatc
tacgggctgatccgggccgggcgctacacgacggcggcggcgatcctgagcagcgagctg
cagcggagctgccgctcccgggccggcctctcgctcctcggctactgctactaccagctg
caggacttcgcggccgcggccgagtgctacgagcagctggtggcgctgcacccggagctg
gacgagtaccggctctaccaggcccaggccctctacaaggccgggctctacggcgaggcc
ctgcgggccgccagccccctgctggacgtgcccgcctatcagggccgcgcctttcgcctc
caggctgccacccactacgctcagggcgatctccctgcagccaagagcctggtggagcag
gtgctcacggctgcggctgagggggcagcggggggctccgacgggtcgtgggaggtgcct
gaggcagaggtgaacctgggctgcctactgtaccgtgaggggcggcatgaggaggcctgc
agcaagtttgcaggtgccatgcaggtgctgggctattccccagagctgtcctacaacatg
gccctgtgctgctatgccgccaagcagtacgaccttgccgtgaagcacatctctgagatc
attgaacgaggcatgcgccagcacccggagctcagcatcggcatgaccaccgagggcatc
gacgttcgcagcgtcggcaacaccctgctcctgcaccgcactgccctggtggaggccttc
aacctcaaggcagccattgagtaccagttgcgccacctggaggcagcccaggaggcgctg
acggacatgccgccgagagccgagaaggagctggaccccgttacactgcacaaccaggcg
ctgatgaacatggacagccggcccactgaagggtttgagaaattgcagttccttctgcag
cagaacccctgcccaccagagacctttggaaacctgctactgctgtactgcaagcaccag
tattatgacctggctgctgatgtgttggcagagaatgcccatctgacctataaactgctc
acgccttatctgtacaacttcttggatgccatgattacatgtcagactgcccctgaggag
gccttccacaagctagatgagctggcagggacactgactgagcagctgagaaatcttgca
aaacaggggcaggaagctaggcaaaaccgggatgctgaagctatcaacaagtcagttagc
gaatatgatgagactctggaaaaatatgtgcctgtcttgatggctcaggccaagatctac
tgggacatggagaattacacaatggtggagaagattttccgcaagtcagttgagttctgc
aatgaacatgaagtgtggaagctgaatgtggctcacgtgctcttcatgcaggaaaacaag
tacaaagaagccattggcttctatgagcccattgtaaagaagcactacgataacatactg
caagtcagtgctattgtgctagccaacctttgtgtttcctatatcatgacaagccaaaat
gaagaggcagaggaactgatgaggaagattgaaaaggaggaggagcagctttcctatgat
gaccctgataaaaagatctaccatctctgcattgtcaacttagtcatcggaacgctctac
tgtgccaaaggaaactatgactttggcatctcaagggtaattaaaagtttagagccttat
aacaaaaagttaggtacagacacctggtattatgccaaaaggtgcttcctgtcattgctg
gagaacatgtctaaacagatgatcatgctgcgtgacaacgtaattcaagagtgcgtccag
tttctggagcagtgtgaactctatggcaggaacatcccagctgttattgagcaacccctt
gaagaagagaggctgcatagtgggaagaacacagttacatatgaagccagacacctgagg
gcactgatgtatgaggtgattgggtggaatatgtaa
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integrated database retrieval system
