Alligator mississippiensis (American alligator): 102575962
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Entry
102575962 CDS
T03087
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha 1, catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102575962 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amj03032
]
102575962 (POLA1)
Enzymes [BR:
amj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102575962 (POLA1)
DNA replication proteins [BR:
amj03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
102575962 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
102575962
NCBI-ProteinID:
XP_014451207
UniProt:
A0A151N032
LinkDB
All DBs
Position
Un
AA seq
1498 aa
AA seq
DB search
MAESGVGRADMSDSGSFAASRSRREKKSKKGHQEALERLKKAKAGEKLKYEVEEFTGVYD
EVDEEQYSKMVRDRQDDDWIIDDDGIGYVEDGREIFDEDLEDDALLPSKKGKGDKTNDKK
NVKKSVVTKPNTIKSMFIASAGKKNTDKAVDLSKDDLLGDILQDLNAEVTPPPVVMMKKK
RPAGTSLNPFSVQSQVPKVMAPVMQKAPTPVRKEAVSLTTSCPKQVNFAARSVANSKKNG
TADYTVKAEEKALEGRLLKVKEEKAVEEEDQGMMDFDDGDFDEPMEAGEMDTAPETVRAL
KKDQEVEKKERQQGNSVKEEPVGHSSLPDISCWDRMGEEEVDLVASEVQVDPNVFPLVNG
EDGDQVFRFYWLDAYEDQYNQPGVVFLFGKVWIESAKAYVSCCVTVKNIERTVYLLPRKM
EMNLSSGQETENPVTIMSVYKEFNDQISVKYKIMKFKSKKVEKHYAFEIPDVPAKSDYLE
VRYSAEFSRLPQDLKGETFSHVFGTNTSSLELLLMSRKIKGPCWLEIKNPQPSSQSVSWC
KMEAVALKPDLVNVVKDLPPPPLVVISLSIRTIPNPKTHQNEVMAIAALVHQNFCLDKAP
PQPPFQTHFCVISKPNDCIFPYDFKDVIKTKNAKIEIAATERTLLGFFLAKIHKIDPDVV
VGHNIYGFDLEVLLQRINACKVPHWSKIGRLRRSNMPKLGGRGGFAERNAACGRMICDVE
ISAKELIRCKSYHLSELVHQILKTERITIPPEEIRNMYSNSPHLMCMLENSWTDAKFILQ
IMCELNVLPLALQITNISGNIMSRTMMGGRSERNEYLLLHAFYERDYIVPDKQVFKKPQQ
KLVDEDEDFEDQTKSKTGRKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNIC
FTTVQRVSSDVQKRTEEGEEEEIPELPDSSLEMGILPKEIRKLVERRRQVKQLMKQPHLN
PDLYLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKEMVQKMN
LEVIYGDTDSIMINTNSTNLEEVFKLGNKIKSEVNKLYKLLEIDIDGVFKSLLLLKKKKY
AALTVEPTGDGKYVTKQELKGLDIVRRDWCDLAKESGNYVIGQILSDQTRDIIVENIQRR
LIDIGENVTNGRVPISQFEINKALTKDPQDYPDKKSLPHVHVAMWINSQGGRKVKSGDTV
SYVICQDGSNLSASQRAYAPEQLQKQENLTIDTQYYLSQQIHPVVARICEPIDGIDSVLI
ATWLGLDPSQFKVHHHYHKDEENDAFLGGLAQLTDEEKYRDCERFKFPCPKCGTENIYDN
VFDGSGQFLEPSLQQCSKKECNELPFCHVTQMNNKLLLDIRCYLKKYYNGWLICEDPACQ
NRTRRLPLSFSRNGPLCQACRKAVLRPEYSDKALYNQLCFYRYIFDVEYAMDKVITEEEK
VWVEKNLALKKIKEVYKKLKNTVDTFLSMSSYSEVNLGKLFQTICTAKYVGDASNERQ
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggccgagagcggggtcggccgcgcggatatgtctgattccggaagttttgcagcatca
cgttctcggcgtgagaaaaaatctaaaaaagggcaccaggaagctcttgaacgtttgaaa
aaagccaaagctggtgaaaaattgaaatatgaagttgaagagttcacaggtgtttatgat
gaagttgatgaggaacaatactccaagatggtcagggaccggcaggatgatgactggatc
attgatgatgatggcataggttatgtagaagatggaagggagatatttgatgaagatcta
gaagatgatgctcttcttcctagcaagaaaggaaaaggtgacaaaacaaatgacaaaaag
aatgtgaagaaatctgtggtaacaaagccaaacactatcaagtctatgtttatagccagc
gcggggaagaaaaacacagataaagctgtagacctgtccaaggatgatttgcttggggat
atcttgcaagatttaaatgctgaggtaactcctccaccagttgtaatgatgaaaaagaag
agaccagcaggaacttcactgaatcctttctctgtacaatcacaagtcccaaaggtaatg
gcccctgttatgcaaaaagctcccactccagtcagaaaagaagctgtttctctaacaaca
tcctgccctaaacaagtcaattttgcagcaaggtctgttgcaaacagtaaaaaaaatggt
actgctgactatacagtaaaagctgaagaaaaggctcttgaaggaaggctcttgaaggtg
aaagaagagaaagctgttgaagaagaggatcagggcatgatggactttgatgatggagat
tttgatgaacctatggaagctggggaaatggacactgcacctgagactgtcagggccctg
aagaaagatcaggaagtagaaaaaaaagagagacagcaagggaattctgtgaaggaagaa
cctgttggacattcttctctcccagatatttcttgttgggacagaatgggtgaggaagaa
gttgatttagtggcttcagaagtccaggtggatccaaatgtcttcccactagtgaatggg
gaagatggtgatcaagtcttcaggttttattggctggatgcttatgaagatcagtataat
caaccaggcgtagtatttctgtttggtaaggtttggattgaatcagccaaggcctatgtc
agctgttgtgtgacagttaaaaacattgagagaactgtttatctattgccacgaaagatg
gaaatgaacctatcttctggtcaagagacagagaatcctgtaacaataatgagtgtctac
aaagagtttaatgaccagatttccgtaaaatacaaaataatgaagttcaagtccaagaaa
gttgaaaagcattatgcctttgagatcccagatgttccagcaaagtctgactatctagaa
gttaggtactcggctgaattttcccggcttcctcaggatctgaaaggagagacattttct
catgtttttggaacaaatacttctagcctggagcttctgttgatgagcaggaagatcaaa
ggaccgtgttggctggaaataaaaaatccacagccctcgagtcagtcagtcagttggtgt
aaaatggaggcagtggcactgaaacctgacctggtgaatgtggttaaagatctgccgcct
ccccctcttgtggtgatttctctcagcataagaacaattccaaatccgaagactcatcag
aatgaggttatggctattgcagctctagtccatcagaatttttgtttggataaagctcca
cctcagcctccttttcagacacacttctgtgttatttccaaaccaaatgattgtatcttt
ccttatgacttcaaagatgtcattaaaaccaagaatgctaaaatagaaattgctgcgaca
gagagaacattgctgggttttttccttgcaaagattcacaaaattgacccagatgttgtt
gtgggtcataatatttatggctttgatctggaagtgctcctgcagagaattaatgcgtgc
aaagtccctcactggtccaagataggtcgactgaggaggtccaacatgccaaagcttggg
ggtcgaggtggctttgctgaaaggaatgctgcctgtggtcgaatgatctgtgacgtggaa
atttcagcaaaggaattgattcgttgcaagagctaccatttgtctgaactggtccatcag
attctgaaaacagagaggataaccattccaccagaagagatacgaaacatgtacagtaat
tctccccacttaatgtgtatgctggaaaacagctggacagatgccaagttcattcttcag
atcatgtgtgagctgaatgttcttcctttagccttgcagatcacaaatatctctgggaat
atcatgtcaaggacaatgatgggtgggcgatctgaacgtaatgagtacttgcttcttcat
gcattttatgagagagactatattgtgccagacaagcaagtttttaaaaagcctcagcag
aagctggtagatgaagatgaagactttgaagatcagactaaatctaagacagggagaaag
aaggcagcatatgctgggggtttagtcttggatccaaaagttggattttatgacaaattt
attttgcttctggatttcaacagcttgtacccttcaattatccaggagtttaatatttgc
tttaccacagtacagagagtgtcatcagatgtgcagaaaagaacagaggaaggagaagaa
gaagaaattccagagttaccagactcatcgctagaaatgggaattttgccgaaagagatc
aggaaactggtagagaggaggcgacaagtgaagcaactgatgaaacaaccacatttaaat
cctgacctctatttacagtatgatatcaggcagaaggctttgaagcttacagctaacagc
atgtatggttgtctaggattttcctacagcagattctatgccaagcctttagctgctttg
gtgacacacaaagggagagagattttgatgcataccaaggagatggtgcagaagatgaac
cttgaagtgatttatggagatacggattccattatgataaatacaaatagcaccaacctg
gaggaggtattcaagctgggaaacaagatcaaaagtgaagtaaacaagctgtataagttg
ttggagattgatattgatggagtcttcaagtccttgttactgctgaagaagaagaagtat
gcagctctaactgtggaaccaacaggagatgggaaatacgttaccaagcaggaattgaaa
ggattggatatagtccgaagagactggtgtgatcttgcaaaagaatctggaaactatgta
attggtcagattctttccgaccagactcgagacataattgtggaaaacattcaaagaagg
ctaatagacataggagaaaatgtgacaaatggcagagtcccaataagccaatttgaaatc
aacaaggcattgacaaaagatcctcaagattatcctgacaaaaaaagcttgccacatgtg
catgttgccatgtggataaactctcagggaggccgaaaggtgaaatcaggcgatacagtg
tcatatgtcatctgtcaggatggatcaaatctgagtgccagccagagagcatatgctcca
gaacagctgcagaaacaagaaaatcttactattgatactcaatactacctttcgcaacaa
atacacccagtagtggctcgaatttgcgagcccatagatggaattgattctgttctcatt
gcaacatggttaggactggatccttcccaattcaaagtccatcatcattatcataaagat
gaagagaacgatgcttttcttggtggcttagcacagctcactgatgaagagaaatacagg
gactgtgaaagattcaagtttccctgcccaaagtgtggaacagagaacatttatgacaat
gtctttgatggttcgggacagtttcttgaacccagcttgcaacaatgcagtaagaaagaa
tgtaatgagctccctttctgccatgttacgcaaatgaacaacaaattacttttggatatt
agatgttacctaaaaaaatattataacgggtggttaatatgtgaggatccagcttgccaa
aatcgcacgcgtcgccttcccctcagcttctctcggaatggaccattgtgccaggcctgt
cggaaggcagtcctccggccagaatattctgacaaggccctgtacaaccagctgtgcttt
taccggtacatttttgatgtggagtatgcaatggataaagttattactgaggaagagaaa
gtgtgggtggagaagaacttagccttaaagaaaataaaggaggtctacaaaaagctgaag
aacacagtagacacctttctgtccatgagtagctactctgaagtgaaccttggcaaactc
tttcagaccatctgcacagcaaaatatgtgggagatgccagtaatgaaagacaataa
DBGET
integrated database retrieval system
