Alligator mississippiensis (American alligator): 102576043
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Entry
102576043 CDS
T03087
Symbol
COPB2
Name
(RefSeq) coatomer protein complex subunit beta 2
KO
K17302
coatomer subunit beta'
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102576043 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102576043 (COPB2)
Membrane trafficking [BR:
amj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
102576043 (COPB2)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102576043 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
102576043
NCBI-ProteinID:
XP_006258049
UniProt:
A0A151M606
LinkDB
All DBs
Position
Un
AA seq
914 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAIHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVAVAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
KDGKNNVAFMSYFLQGKLDSCLELLIKTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKI
NQKAAESLADPTEYENLFPGLKEAFVVEEYVKQTHSDLRPAREYPLVTPNEERSLLEESK
GFEPSGVIVSEETEERVPSPNLVMVSPVPAMSEPLPVTKDEKVLLELEEEDLDNLDLEDI
DTTDINLDEDILDD
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgacttgatattaagcgaaaactaacagctcggtctgaccgagtgaagagt
gtagacttgcatcccacagagccatggatgttagctagtctttacaatggaagcgtctgt
gtttggaatcatgaaacacagactctagtgaagacctttgaagtatgtgatctgccagtg
agagctgctaaatttgtggccagaaagaactgggttgtgacaggagcagatgacatgcaa
attagggtattcaattacaacaccttggaaagagttcatatgtttgaagcacactcagat
tatattcgttgcattgccatacatcctacgcagcccttcattctgaccagcagtgatgac
atgcttattaaactctgggactgggataaaaaatggtcttgttctcaggtgtttgaaggc
cacacccattatgttatgcaaattgtcataaatccaaaggataataatcaatttgccagt
gcatcgttggataggacaatcaaggtgtggcagcttggttcttcttcgcctaacttcact
ttggaaggccatgaaaagggagtgaactgtatcgattactatagtggaggagataagccc
tatctcatttcaggagcagatgatcgccttgttaagatctgggattaccagaataaaact
tgcgtgcaaacactagagggacatgctcagaatgtatcctgtgtcagcttccaccctgag
ctcccaatcatcatcacgggctctgaagatggaacagtccgcatttggcactcaagcact
tatcgcctagaaagtaccttaaactatggcatggagagggtgtggtgtgtggccagcttg
agaggttctaataacgtggctttggggtatgatgaaggcagcattattgttaagcttggc
cgtgaagaacctgccatgtccatggatgctaatgggaaaattatttgggctaagcactca
gaagtccaacaggctaacttgaaagctatgggagatgctgaaattaaagatggagaaaga
ttgccactggctgtaaaggatatggggagctgtgaaatctatcctcagactattcaacat
aaccctaatggacggtttgtagtagtatgtggggatggtgaatacatcatttacacagct
atggctttgagaaacaagagttttggttctgcccaggaatttgtatgggcacatgattct
tcagagtatgcaatcagagaaagcaatagtgttgtaaagatatttaagaacttcaaagag
aagaagtcctttaaacctgactttggagcagaaggtatctatggaggcttcttactaggt
gtaagatctgttaatggcttggcattctatgactgggacaacacagaactgatccgtaga
attgaaattcagcccaaacatattttctggtctgactcaggtgaacttgtctgtatcgcc
acagaagaatcattctttattctgaaatacctgtctgaaaaagttgcagtagcacaggaa
acacatgagggagtcactgaagatgggattgaagatgcttttgaggttctgggtgagatt
caggagattgtgaaaacaggattgtgggtaggtgactgctttatttataccagttccgtg
aacagacttaactactatgttggaggagaaattgtcactattgcccacttggacaggaca
atgtatttgttgggctatatacctaaggacaacaggctttatctgggtgacaaagagcta
aatattgtcagttactccttgctggtttcagtgcttgagtaccaaactgcagttatgagg
agagacttcagtatggctgataaagttcttcccacaattccaaaggaacagaggaccaga
gttgcacattttcttgaaaaacagggcttcaaacagcaagctcttgctgtatccacagat
cctgaacatcgctttgagcttgctcttcagcttggagaattaaagattgcataccagctt
gcagtggaagcagagtcagaacagaaatggaaacaacttgctgagcttgccatcagcaag
tgccagtttggcttagcccaggaatgcctgcaccatgcacaggactatggaggcttatta
ctcttggctacagcatcaggaaatgccagcatggtgaacaagctagcagagggagcagaa
aaagatggcaagaataatgtagcatttatgagctatttcttgcagggaaagcttgactcc
tgcttggaactcttaattaaaactggacgtttgcctgaagctgccttccttgcacgtaca
tatttgccaagccaagtttcaagggtagttaaactatggcgagagaacctgtctaaaatc
aaccagaaagcagcagagtcccttgctgatcccacagaatatgaaaaccttttccctgga
ttaaaagaagcttttgttgtggaagaatacgtcaaacaaactcattctgacttgcggcct
gccagggaatacccacttgtcaccccaaatgaagaaagaagcttactggaagaatcgaag
ggttttgaaccttcaggagtaatagtatcagaggaaactgaagaacgtgttccatctcct
aatctagtaatggtgtctccagttccagcaatgtctgaaccacttccagtaacaaaagat
gaaaaggtactactagaattggaagaagaggatttagataatttggatctggaggatatt
gacaccacagatattaacctggatgaagatatcttggatgactaa
DBGET
integrated database retrieval system
