Alligator mississippiensis (American alligator): 102576073
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Entry
102576073 CDS
T03087
Symbol
HMBOX1
Name
(RefSeq) homeobox containing 1
KO
K24885
homeobox-containing protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102576073 (HMBOX1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
102576073 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_24
CUT
HTH_26
HTH_37
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
102576073
NCBI-ProteinID:
XP_014465719
LinkDB
All DBs
Position
Un
AA seq
460 aa
AA seq
DB search
MALVRQTKTVRLGLLETMSHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETLDRLDQ
EHSDKFGRRSGYGGGSYGNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTN
QNGRESNERLSAFNGKMSPTRYPLANSLAQRSYSFEASEEDLDIDDKVEELMRRDSSVIK
EEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGA
TLSMRPAPIPVEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDE
AKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGID
VQSPGGHSNSDDVDGNDYSEQDTWQVRNGEEEGRCSEGGREAEKVEEDRRICSKQDDSTS
HSDHQDPISLAVEMAAVNHTILALARQGANEIKTEALDDD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgtcaggcagacaaagacggtccgtctgggtctgctggaaaccatgtctcac
tacacagatgaacccagatttaccatagagcagatagacctgcttcagcgcctgagacgt
acgggaatgaccagacatgaaatcctccatgccttggaaactttggaccgtcttgatcag
gagcatagtgacaagtttggaagaaggtctggttacggcggcggttcttacggcaacagt
accaacaacgtcccagcatcttcttcgacagccacagcttccacgcagacccagcactct
gggatgtccccatcacccagcaacagttacgacacctccccacagccttgcactactaat
cagaacgggagggagagtaacgagaggttgtcggcattcaacgggaagatgtctcccact
cgctatccgcttgcgaacagcttggctcaaaggtcgtacagtttcgaagcctcggaagag
gacctggacatagatgacaaagtagaagaattgatgaggagggacagcagcgtgataaag
gaggaaatcaaagcctttctagccaatcggaggatttcccaagcagttgttgcacaggta
acaggtatcagccagagccggatctcccattggctgttgcagcagggatcagacctgagt
gaacaaaagaaaagggcattttacagatggtaccagcttgagaagacaaaccccggggct
acgttaagcatgagacctgctcctatcccagtagaagagccagaatggagacagacacct
cccccagtcacagctacctctgggaccttcagactacggcggggcagtcggttcacgtgg
aggaaggagtgcctggctgttatggagagttacttcaatgagaatcaatatcccgatgag
gcaaagagagaagaaattgcaaacgcctgtaatgcagttatacaaaagccaggcaaaaag
ttgtcagatctggaacgagttacctccctcaaagtgtacaactggtttgccaaccgaaga
aaggaaatcaagagaagagccaatatcgaagcagcaatcctggagagccatgggatagat
gtacagagtcctggaggccactccaacagcgacgatgtggacgggaatgactattcagag
caggacacttggcaagtacgcaatggggaggaggagggacgatgttcagagggaggcaga
gaagcagagaaggtagaagaagacaggaggatctgctccaaacaagatgacagcactagc
catagtgaccatcaagaccctatttcattagccgtggaaatggcagcggtaaaccatacc
atcttggcattggcccggcaaggagctaacgagatcaagacagaggctctagacgacgac
tga
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