Alligator mississippiensis (American alligator): 102576273
Help
Entry
102576273 CDS
T03087
Symbol
VSX1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102576273 (VSX1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
102576273 (VSX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
102576273
NCBI-ProteinID:
XP_019335609
LinkDB
All DBs
Position
Un
AA seq
223 aa
AA seq
DB search
PFPALLADEDSLCGDRSDLKASASQIKRKKRRHRTVFTAHQLEELEKAFNEAHYPDVYAR
EMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESIIN
SAKSGLMGSCAPWLLGMHKKSMEVTRRSENEEKVMDNWRSEHAEEELKVKQGDQQRSSDK
LCTMDTSEDTAIDLSSTAKQEKRSTLRQCLSRDLRTEKQDNDH
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ccctttcccgcgctgctggcagatgaggacagtctgtgcggggacaggagcgacctgaaa
gcctccgcgtcgcagatcaagaggaagaagcggcggcataggacagtgtttacggctcac
cagctggaggaattggagaaggctttcaacgaagctcattacccagatgtatatgcccgg
gaaatgctagcaatgaaaactgagctcccagaggacaggatacaggtctggtttcagaac
cgaagagccaagtggcggaagcgtgagaagtgctggggcaggagcagtgtcatggcagag
tatggcctctacggggcaatggtgaggcactccattcctctccctgagtccatcatcaac
tctgccaaaagtgggctcatgggctcctgtgccccttggctactggggatgcataagaag
tcgatggaagtgaccagaagatctgaaaacgaggagaaggtgatggacaactggagatca
gaacatgctgaggaagaattaaaagtgaagcaaggagatcagcaaagaagctctgacaaa
ctgtgtacaatggatacttcagaggacacagccattgacctctctagcacggccaagcaa
gaaaaacggagcactttgcggcagtgtctcagcagagacctccggacagagaagcaggac
aatgaccactaa
DBGET
integrated database retrieval system
