Alligator mississippiensis (American alligator): 102576545
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Entry
102576545 CDS
T03087
Symbol
WDR82
Name
(RefSeq) WD repeat domain 82
KO
K14962
COMPASS component SWD2
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102576545 (WDR82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102576545 (WDR82)
03036 Chromosome and associated proteins [BR:
amj03036
]
102576545 (WDR82)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102576545 (WDR82)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
102576545 (WDR82)
COMPASS/SET1 complex (yeast)
102576545 (WDR82)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_IFT140_1st
PEP5_VPS11_N
WD_LRWD1
Beta-prop_WDR35_TULP_N
VPS8_N
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
Beta-prop_EIPR1
MinC_C
Motif
Other DBs
NCBI-GeneID:
102576545
NCBI-ProteinID:
XP_006270425
UniProt:
A0A151NGM1
LinkDB
All DBs
Position
Un
AA seq
313 aa
AA seq
DB search
MKLTDNVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHTKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLILISTNGGFIRLIDAFKGAVLHTFGGYNNSKA
VTLEASFTPDSQFIMIGSEDGKIHVWNGESGMKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggacaacgtgctgcggagcttccgcgtggccaaggtcttccgtgagaac
tcggacaagatcaactgcttcgacttcagccccaatggcgagaccgtcatctccagcagt
gacgacgactccatcgtgctctatgactgccaggagggcaaaccaaagagaacgctgtac
agtaaaaagtatggagtggacctcatcaggtacacacatgcagccaacactgtggtgtac
agctccaacaaaatagatgatacaatccgatacctctcactgcatgacaataaatacatc
cgatatttccctgggcatacaaagagagtggttgctctctccatgtctccagtggatgat
acttttatttctggatcacttgataagaccatccggctttgggatctccggtctccaaac
tgtcagggtttaatgcatcttcaggggaagcctgtgtgctcctttgatccagaagggttg
atttttgctgcgggagtcaattctgaaatggtaaagctttatgatcttcgttcttttgac
aagggtccatttgcaacatttaagatgcaatatgatcgaacctgtgagtggacaggtttg
aagttcagtaatgatggcaaacttatcctcatatcaaccaatggtggattcattcgactg
attgatgccttcaaaggagctgtactgcatacatttggggggtataacaacagtaaggct
gtcacactggaggcatcatttacaccagactcccagttcatcatgattggttctgaggat
ggaaagatccatgtctggaatggggagagtgggatgaaggtggctgtattggatggtaaa
cacacaggtcctataacctgtctgcaattcaatcctaaattcatgacctttgccagtgca
tgttccaatatggcattttggttgccaaccatagatgactaa
DBGET
integrated database retrieval system
