KEGG   Alligator mississippiensis (American alligator): 102576794
Entry
102576794         CDS       T03087                                 
Symbol
VAMP8
Name
(RefSeq) vesicle associated membrane protein 8
  KO
K08512  vesicle-associated membrane protein 8
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04130  SNARE interactions in vesicular transport
amj04140  Autophagy - animal
amj04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    102576794 (VAMP8)
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    102576794 (VAMP8)
   04140 Autophagy - animal
    102576794 (VAMP8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amj04131]
    102576794 (VAMP8)
Membrane trafficking [BR:amj04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    102576794 (VAMP8)
SSDB
Motif
Pfam: Synaptobrevin Pex24p Ferlin_C SpoIIM MgtE ETRAMP MCU Integrase_H2C2 Sec20 Prominin DUF4795 Baculo_F DUF2207_C zf-H2C2 RIFIN UCP020893 Orf78 Pox_EPC_I2-L1 CD34_antigen DUF2031 MTUS1_CCDC69_CC2 TMF_TATA_bd CdaS_N
Other DBs
NCBI-GeneID: 102576794
NCBI-ProteinID: XP_006275073
UniProt: A0A151NU63
LinkDB
Position
Un
AA seq 94 aa
MASEHVRDLQSEVEGVKSIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTTQKVAR
KYWWKNIKTMVIIGLIVAIILIFIILFATGVIPS
NT seq 285 nt   +upstreamnt  +downstreamnt
atggcatcggaacatgtgcgggacctgcagagtgaggtggagggcgtcaagagcatcatg
acgcagaatgtggagcggatcctggcccgcggtgagaacctggaccacctgcgcaacaag
actgaggacctcgaggccacttcggagcacttcaagacgacaacgcagaaggtggcacgc
aagtactggtggaagaacatcaagaccatggttatcatcggcctcattgttgccatcatc
ctcatcttcatcatcctcttcgctactggcgtcatcccctcctag

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