KEGG   Alligator mississippiensis (American alligator): 102576802
Entry
102576802         CDS       T03087                                 
Symbol
SNRPD2
Name
(RefSeq) small nuclear ribonucleoprotein D2 polypeptide
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102576802 (SNRPD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amj03041]
    102576802 (SNRPD2)
   03032 DNA replication proteins [BR:amj03032]
    102576802 (SNRPD2)
Spliceosome [BR:amj03041]
 Complex A
  U1 snRNP components
   Sm proteins
    102576802 (SNRPD2)
  U2 snRNP components
    102576802 (SNRPD2)
 Complex B
  U1 snRNP components
    102576802 (SNRPD2)
  U4/U6.U5 tri-snRNP components
    102576802 (SNRPD2)
 Complex C
  U2 snRNP components
    102576802 (SNRPD2)
DNA replication proteins [BR:amj03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     102576802 (SNRPD2)
SSDB
Motif
Pfam: LSM Hfq GIT1_C Ldh_1_C
Other DBs
NCBI-GeneID: 102576802
NCBI-ProteinID: XP_006277882
LinkDB
Position
Un
AA seq 118 aa
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLIAGK
NT seq 357 nt   +upstreamnt  +downstreamnt
atgagtctgctgaacaagccgaagagcgagatgacgcccgaggagctgcagaagcgcgag
gaggaggagttcaacacggggccgctgtccgtgctcacgcagtcggtcaagaacaacacg
caggtgctcatcaactgccgcaacaacaagaagctgctgggccgcgtcaaggccttcgac
agacactgcaacatggtgctggagaacgtgaaggagatgtggaccgaggtgcccaagagc
gggaagggcaagaagaagtcgaagccggtgaacaaggatcgctacatctccaagatgttc
ctgcgcggcgactccgtcatcgtcgtgctgcgcaaccccctcatcgcaggcaagtga

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