Alligator mississippiensis (American alligator): 102576814
Help
Entry
102576814 CDS
T03087
Symbol
RB1CC1
Name
(RefSeq) RB1 inducible coiled-coil 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102576814 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
amj01009
]
102576814 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102576814 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
amj03029
]
102576814 (RB1CC1)
Protein phosphatases and associated proteins [BR:
amj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102576814 (RB1CC1)
Membrane trafficking [BR:
amj04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102576814 (RB1CC1)
Mitochondrial biogenesis [BR:
amj03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102576814 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
102576814
NCBI-ProteinID:
XP_014462324
LinkDB
All DBs
Position
Un
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVSDLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTHSYQKLLFKFENVYSSYLQ
SIDDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLESSTDRGGEESEGTEDEKSA
ELVLFSDIPRMNSKSVVASFCRSVEHSALDSAAPETITDNKESSQNTTVQDNETSMELKE
NDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTHKPRRFDSELPDISLNDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLSEQKASNSQTSPQSATTPRTES
TTGTAIATSSRTPPSFSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIGHPSLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNIISDPQSPEMMVESLYSSVINAIDSR
RMQDTNVCAKGGLVENTSLNICMEKCRVIAQESQTNLKNIKEDLCHFRVLVQKEQCDFSN
SLKCTSVEIRNVIEKVKLSLEKTLTDKHQKELQSLKSEYETKINKLLEDGEENKKKIKKL
KEDLAGLEEVLQNKDHEFAVVKNEKECVVHLQNEKDQKMLELECQMKNQNYELKELRHSR
EIVLEDMKKLHLENDEKIQILKTEFQRLEQSHLKELENNLQIRHTQEFERIVAEHKDCLD
ELKKENLHRLEQMQESHAAVVQEKEKQVEELKLKVSDLSDLRCKLEVELALKEAETDEMK
VMLEESRIQQQETIKSLIDKETESLRKEIDALNLKLQINNDDYQVGLAELRTLMTIEKDH
CISELVNRHEEESNLLRTELSKITSLHQEAFEEEKRLKEQIIELQSKLETEVNALEKEKE
KKMVLCEQQEKYEAVIHKLEEEKLLLISNQEDDRKLLIQKLSCEKEDAVQIAHKEFELQR
EAVEKELLEKIQQLEMQVNLSPPLELSSESSLVAKLQEELKEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLTREKMKKENIINDLSDKLKMLTQQQERDKDLIETLSEDR
ARLLEEKKKLEEEVTKLRSSNFIPSAYLPAGSETCGACASDLTSETDRLASEIIAEGKMD
STMETSMMAVHENIHISEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtattccttgtcaacactggaacaacccttacatttgacaccgaactt
gcagtacagaatgtgtccgaccttaaacatgcaatccaaacaaaatataagattgctatt
cagcaccaggtactggttgtcaatggaggggaatgtatggcaccagacagaagagtctgt
agttacagtgctggaacagacacaaacccaatttttctattcaacaaagagatgatctta
tgtgaacgtccacctgctattcccaaaactacgttttcagcagagaatgagatggaatta
aaggttgaagaatctcttatgatgcctgcagtttttcacacagtagcatcacggacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgtc
catgatgaacatcttcagcatcaaggctgggctgccataatggccaatttggaagattgc
acacattcttaccaaaagctgcttttcaagtttgaaaatgtatactcaagctacctgcaa
tctatagatgatattaagctgaaactcacacatttggggacagctgtttctgtcatggcc
aagatcccactgctggagtgcctaaccagacatagttacagagagtgtttaggaagattg
gaatcttctactgaccgtggaggagaagaaagtgaaggaactgaggatgaaaagtctgca
gaactagttcttttttctgatattcctagaatgaacagtaaatcagtggtagcctcattt
tgcaggtcagtggagcattcagccctggacagcgcagctcctgaaactatcacggacaat
aaagaatccagtcaaaacactactgttcaggacaatgaaacttcaatggaactgaaggag
aatgatcaaccttccttcaatgtctctctgttagactggataaatgttcaggataggcct
aatgatgtggaatcactggtcaggaaatgttttgattctatgagcaggcttgatccaagg
atcattcagcccttcttggcagaatgtcgacagactattgccaaactagataatcagaac
atgaaggctattaaaggcctggaggacaggctgtacgcgctagaccagatgatagctagc
tgcagcagactggtaaacgaacaaaaagaacttgctcagggatttttggctaaccagaag
agagctgagaacttaaaagatccttctgtgctacctgacttatgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacaggaaactcttagatattaagcaaaaatgtacc
actgccaaacaagaacttgcaaataatctacaagtcagactgaagtggtgttgctttgta
atgcttcacgctgaccaagatggggagaaactgcaagccttgcttcgccttgtgacagaa
ttactagaaagggtcaaggtggttgaggctctcagtactgttcctcaaatgtactgtcta
gctgtggttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggctggt
gctttaataaaagatgggaaacatctgtatgaagctgaaaaggcaaaaagggagtctttt
ggcaaattgtttaggaaatcttttttaaggaatcgtttgtttaggggacttgattcctgg
cctccatccttttgtacacacaagcctcgcagatttgatagtgagcttccagatatctca
ttaaatgacttgcagtttctgcagtctttttgtccttcagaagtacaaccattactcagg
gttcctatactttgtgactttgaacctcttcaccagcatgtacgtgcgctacataacctg
gtgaaagcagcccagagtttggatgaaatgtcgcagaccattacagatctactgagtgag
caaaaggcctccaacagtcaaacatcgccacagtctgccaccacaccaaggacggaaagt
acaacaggaactgcaattgctacctcttctagaacacctccatcattcagtcttcagggt
cctctgtgtcctcctgtgtgtccccctgctccattagaggaactgtctccggatagtatt
gatgctcatacatttgattttgaaacgattggccatccaagcttagaacaagcccttaag
caaggctctttagatttggattcactagcagaaagtccagaatcggattttatgtcagca
gtgaatgaatttgtaatagaggaaaatccagtatcccctaatataataagtgatccacaa
agtccagaaatgatggtagagtccctctattcttcggttattaatgcaatagacagcaga
cgcatgcaagacacaaatgtttgtgcaaaaggaggtttagtagaaaacacttctctaaat
atttgtatggagaaatgtagagttattgcccaggaatcacaaacaaacttaaagaacata
aaagaagacctttgccactttagagtacttgtacaaaaagaacaatgtgacttttctaat
tctttaaaatgtacgtcagtagaaataagaaatgttattgaaaaagtaaaactttcactt
gagaaaacactaactgataaacatcaaaaagaattgcagtctctgaaaagtgaatatgaa
actaaaattaataaactactggaagatggtgaggaaaacaaaaaaaagattaaaaaatta
aaagaagacttagcaggccttgaagaagttctgcaaaataaagatcatgaatttgcagtg
gtgaagaatgaaaaagaatgtgttgttcacctacaaaatgagaaagatcagaagatgctt
gaattagaatgtcagatgaagaatcaaaattatgaacttaaggaactcagacattcacgt
gagattgtactagaagatatgaaaaaacttcatcttgaaaatgatgaaaaaatacaaatt
ttgaagacagagtttcagcgtcttgaacaaagtcacctaaaagaattggaaaacaattta
cagatcaggcatacccaggaatttgaaaggatagtagctgagcacaaagattgcttagat
gagttaaaaaaagaaaacttgcacagacttgaacaaatgcaggaatctcatgctgcagtt
gtgcaagagaaggaaaaacaggtagaagagttaaaactcaaagtttctgatctgtctgat
ttgaggtgcaaattagaagttgaacttgcgctgaaggaagcagaaacagatgaaatgaag
gtgatgttagaagaaagcagaatccagcaacaggagaccataaagtctcttattgataaa
gaaactgaaagcttaagaaaagagatagatgcattaaatctcaagttacaaataaataat
gatgactatcaagtgggcttagcagagctgagaactttaatgacaattgagaaagatcat
tgtatttcagaattagtgaacaggcatgaagaagaatcaaatttgcttagaactgaatta
agcaaaataacctctttacatcaggaagcttttgaagaagaaaaaagactcaaagaacaa
ataatagaactgcaaagtaagttagaaactgaagtgaatgccctagaaaaggaaaaggag
aaaaaaatggttctgtgtgaacaacaggaaaaatatgaggctgttatccataaacttgag
gaagagaaactgctgttaatatctaaccaagaggatgatagaaaattgcttattcaaaag
ctcagttgtgaaaaagaggatgcagtgcaaattgctcataaagagtttgaattgcagagg
gaagctgttgaaaaagagcttttggaaaaaatacaacaacttgagatgcaagtaaatctg
agtcctcctcttgaattatcttctgaatcaagcttagttgctaaacttcaagaagaactg
aaagaagagaaaatgaaatttttagagcaacttgaagagcaagagaaaaggaagaacgaa
gaaatgcaaaacattagaacctctttaactgcagaacagcagactaattttaacacagtt
ctgacaagagaaaaaatgaaaaaggaaaacataataaatgatcttagtgacaagttaaaa
atgctaacccaacagcaagaaagggataaagatctgattgaaacactttccgaagatcgg
gctcgtttacttgaagaaaagaaaaaacttgaagaagaagttactaaactgagaagcagt
aacttcattccatcagcatatctacctgcaggatcagaaacttgtggagcctgtgcatct
gatcttacatctgaaacggacagattggcttctgagattatagctgaaggaaagatggat
tccaccatggaaactagtatgatggctgtgcatgaaaacatccatatatctgaagaaaaa
cagaggataatgttgctagaaagaacattgcagctgaaagaagaggagaataagcggtta
aatcaaagattaatgtcccaaagcatgtcatctgtttcttcaagacattctgaaaaaata
gctatcagagattttcaggttggcgatttggttctcataatcttggatgaacgccatgac
aactatgtgttgtttactgttagtccaaccttgtatttcttacattcagaatctcttgct
gctttagatctcaaaccaggtgagtgtgcttcaggtgcatctagaagaccttgggtgcta
ggaaaggtaatggaaaaggagtattgccaggcaaaaaaggcacaaaacagatttaaagtt
cctttgggtacaaaattctacagagtgaaagcagtgccatggaacaagaaagtataa
DBGET
integrated database retrieval system
