Alligator mississippiensis (American alligator): 102576942
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Entry
102576942 CDS
T03087
Symbol
LMO7
Name
(RefSeq) LIM domain 7
KO
K06084
F-box protein 20
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102576942 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102576942 (LMO7)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102576942 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
PDZ
LIM
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
102576942
NCBI-ProteinID:
XP_019344133
LinkDB
All DBs
Position
Un
AA seq
1464 aa
AA seq
DB search
MHNSHKDDMSYRRLSAVEPKPLTDFNRFLPSKSKPSAYMPAPLRKKRIEKNEDNRRSWAS
PVSTESDGTLSSQKRSDSEDEDSADKQSSAAIGNEPRLSLDLNSHYGKDPNHTKQTAEYV
RKSLLQMAEGRKMESSDQPSQFSLLQALQKYTDYLSSETKTKIDPTSGPRLVTCRKNVSF
TPGYSQKETENGELYPDLENDDLFVRRTGASHVNPVVLQDPDYFKKSSKQEPSLEGEIIL
QPREEQTVIPDLEKDDMIVRKAQAQKKAVPLSGAPDKYHPALFPDPWSLPEEIRSKFLCL
LEKSSTLQEKKNAGMVLSPSLRQKDDMLTRKIDSWKVGSIVQPISFIPGPCSEEDWKKWE
AIREASKVRHKKRQMVERLFQKLSDEHGSKSLTDISADELQSMRKIRFEELQKIKAQLQE
QDQRWQDDLAKWKSRRKSFTSDLQKKKEEREDIERKTSEVSVRNTKSLKEMQRDREKRDH
ETYGDNQRTTERKWIYSSYDDVFSEEKTSSRSSVAKDYLVEKDTTDVFKNNEKPLAAPTS
KENLQKWESYATGETQIPSKSLSEKQSSAPLSTHHSVNAQTGSARVSASLPRSYQKTDTS
RLTSVVTPRPFGVHTRGISSLPRSFTMDDAQKYNGEVDRAKRAPALFTSNSFSQPETRQP
LSTTALKSGNEDAEDEEEEEEEEKEEDIKRTYSPISVASAVSQDQDAGSHGLKSEYYTSP
DSVTVAPSAERRSLPEPEVSRSRDQYSEMRISINQKPGKSHNFGFTANWNTSGVFVQSIE
KGSPADLCQLHVDDEIITVSGTKVSHMDPAEGEEAIANALETGNLVMDVRRYGKNDWGKD
QPSLPYLRHKILNLTSLAANIVGTSENKWIDATSGDHFPTTSSDISTKTDFNSSLQNSDT
GAKVINGMQADLCSNEQKESESISLKNLKRRSQFFEQGGSESAISDLSVPSITVPSRRVW
DQEEERKRQEKWQKEQERLLQEKYKREQEKLREEWLRAQEEAEKESSKYQDEEQCVLTAD
TMSITAHVPLASSWRTVMGGDADVPEGGGGSEQGSQQQQNEKEKDEERRWLQEEQGLEEK
EILHLKQKSELQELELEQRRKEIEQQYTEDQKRWAEAEEQHQRFYKHYDEPKTIEDRSGH
FLADRSKSRSTSELDDYTTNRNGQYEKPLGGIARGLLQDELNQKQSVKMQQETKEPEQKA
PRRQMLYHMKYNNPKQGTNNKYLEKSRNVPDSQKGSQKEPAMSQAEAERQQILQEMRKRT
SLHTDNSWIRQRSSSVYKEPITVHNTLMRRGESLDNLDSSRTSSWRHHSWMNQSVSSSQD
YTRPAPPAGSTSNRAYTCTPSSNVAPSSTSSVRTASSTHTLPSAPSPVPCAQSPTSASQS
GSQTRNKSISGKKICSYCNNVLGKGAAMIIESLGLCYHLHCFKCVACKCNLGGSGSGAEV
RIRNNELFCNDCYIRFKTGQPTSM
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgcacaattcccataaagatgacatgtcctatcgcagactatctgcagttgaaccaaag
cctcttacagatttcaatcgtttcttacccagtaaaagtaaaccatcagcatatatgcca
gcacctttgaggaaaaagaggatagaaaaaaatgaggacaacagaagaagctgggcaagt
cctgtctccaccgagtcagatggaacactttcaagccaaaagagatcagattctgaagat
gaggattcagccgataaacaaagcagtgctgctattggtaatgaaccaagactaagtctt
gatttgaacagccattatggaaaggatccaaaccatactaaacaaactgctgaatatgta
cgaaaatctctgttacaaatggcagaaggcagaaagatggagtcttctgatcaacccagt
cagttttcattacttcaggccctgcaaaaatatactgactacttgtcttctgaaacaaag
accaaaattgatcctacttctggccctaggctcgtaacatgcagaaagaatgtttctttt
acaccaggatacagtcagaaggagactgagaatggagaactgtacccagacttggaaaat
gatgatttatttgtacggaggactggggcttcccatgtgaatccagttgttcttcaggat
cctgactattttaaaaaatcctctaagcaagagccttccctagagggtgaaataatattg
cagcccagagaagaacaaactgtgattccagacttagaaaaagatgacatgattgttcgt
aaagcccaagcacagaaaaaagcagtgcctttatcaggtgctccagacaaataccatcct
gcactctttcctgatccttggagccttccagaggaaatccggtccaaattcctttgctta
cttgaaaagagcagcacgttgcaagagaaaaaaaatgctggtatggtattatcaccctct
ttacgacagaaggatgatatgttgactcgaaagatcgactcttggaaagtaggaagcatt
gtgcagccaatcagttttataccaggtccatgcagtgaagaagactggaaaaaatgggaa
gctatccgagaagccagcaaagttagacacaagaagcggcagatggttgagagactgttt
caaaagctttctgatgagcatgggagtaagtctttgactgatatcagcgcagatgagctg
cagtcaatgcgcaagattcgttttgaagagctacagaaaataaaagcccagctacaagaa
caagaccaaaggtggcaagatgatcttgcaaaatggaagagtcgccgaaaaagtttcact
tcagatttgcaaaagaaaaaggaagaaagagaagacattgaaaggaaaacctctgaggtt
tctgtaagaaataccaaatcactgaaagaaatgcagcgagacagggagaagagagatcac
gaaacctatggtgacaaccagcgaacaactgaacgcaagtggatttattcgtcatatgat
gatgtgtttagtgaagaaaaaacatcttctagatcctcagtagcaaaagattacttagtt
gaaaaagataccactgatgtgtttaagaacaatgaaaaacctttagctgcgccaactagc
aaagagaatttgcagaagtgggagagctatgcaacaggtgaaacgcaaattccatctaaa
agcctgtccgaaaaacagagctcagctcctttgtctactcaccattcagtgaatgcacaa
actgggtcagctcgggtttcagcttctctacccagaagttaccagaaaactgatacctct
aggttaacatctgtggttacaccaagaccttttggtgtccacacacgaggaatctcatca
cttcctagatcatttacgatggatgatgcccagaagtataacggagaagtagatagagcc
aagagagctccagctttgttcaccagcaattcattttcacaaccagaaacaagacagcct
ctttctaccactgcactgaaaagtggcaatgaagatgcagaggatgaggaagaggaggag
gaagaagaaaaggaggaagatattaaaagaacatattcgcctatttcagtagcctctgct
gtatcccaggaccaggatgctggaagccatggtcttaaatcagagtattatacttctcct
gactctgttacagttgcaccctctgcagaaagaagaagcctgccagagcctgaggtttca
aggtcacgggaccagtacagtgaaatgagaatcagtataaaccagaaaccgggtaagagc
cacaactttgggtttacagcaaattggaatacttctggggtctttgtgcaatcaattgaa
aaaggtagtcctgcagatctttgccaactgcatgtagatgatgaaatcattactgtcagc
ggcacaaaggtgtcacacatggaccctgctgagggggaagaagccattgctaatgctcta
gaaactggaaacctggtcatggatgtcagacgatatggaaagaatgattggggaaaagac
cagccttccctgccatatttaaggcataaaatcctcaatctcaccagtctggctgccaac
attgtaggtacatctgaaaataaatggattgatgcaacttctggagatcattttcccact
acttcttcagacatatcaacaaaaacagatttcaacagcagtcttcaaaattctgatacc
ggagccaaagtgataaatgggatgcaagcagatttgtgttctaatgagcaaaaagaatct
gaatctatttctttgaaaaacttaaaaagacgatcacaattttttgaacaaggaggctca
gaatctgcaatatctgatctttcagtcccatccattactgttcctagtcgccgggtttgg
gatcaagaggaagagagaaaacgacaagaaaaatggcaaaaagaacaggaacgtttactg
caggagaaatataaacgtgagcaagagaaattgagggaagaatggctgcgggctcaggag
gaagcagaaaaagaaagttcaaaataccaagatgaggagcagtgcgtcctaactgcagac
acgatgtctatcactgcacatgtgcccttggcttctagttggagaacagtcatgggagga
gatgctgatgttcctgaaggaggtggaggaagtgaacaggggtcacagcagcagcagaat
gagaaagagaaagatgaggaaaggaggtggcttcaggaggaacaaggactcgaggagaaa
gaaatcctccacttgaaacaaaaaagtgaactccaagagctagagcttgagcaaagacgt
aaggagatagagcagcagtatactgaggaccagaagcggtgggcagaggcagaggagcag
catcaaagattttataaacattatgatgaacctaaaaccattgaggatcgatctggccac
tttcttgctgacagaagtaaatccaggtcaacttcagaattggatgattacaccacaaac
agaaacggtcaatatgagaaaccattgggtggtatcgcccgagggttgctacaggatgag
ctaaaccaaaaacaaagtgtgaagatgcagcaagagaccaaagaacctgaacagaaggct
ccaagaaggcaaatgctttatcacatgaagtataataacccaaagcaaggtacaaacaac
aaatacttggaaaaatctcggaatgttcctgattcgcagaaagggtctcagaaagagcct
gccatgtcccaagcagaggcagagagacaacaaatccttcaggaaatgagaaagagaacg
tcactgcatacagacaacagctggattaggcagcgcagttccagtgtatataaggaaccc
attactgtacacaacactttgatgaggagaggtgaatctctagacaatcttgattcttca
agaacaagctcgtggagacatcattcatggatgaatcagtctgtctcatctagtcaagat
tatactcgccctgctcctccagcagggtctacttcaaatcgggcctacacatgcactccc
tcctccaatgtagcaccttcatcaaccagctctgtcagaacagcatcttcgacccacact
ctcccatcagcaccatctcctgttccttgcgctcagtctcctacctctgcttcccaatcc
gggtctcagacacggaataagtcaatcagtgggaagaaaatatgttcatactgtaataac
gttctgggcaaaggagccgccatgatcatcgaatctcttggtctttgttatcatttacat
tgttttaagtgtgtggcttgtaaatgcaaccttggaggatcaggctcgggagctgaagtc
agaattcgaaacaatgagctcttctgcaatgactgctatatcagatttaaaactggacag
ccaacctccatgtga
DBGET
integrated database retrieval system
