Alligator mississippiensis (American alligator): 102577062
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Entry
102577062 CDS
T03087
Symbol
SIGLEC1
Name
(RefSeq) sialic acid binding Ig like lectin 1
KO
K06548
sialoadhesin
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102577062 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
amj04090
]
102577062 (SIGLEC1)
04091 Lectins [BR:
amj04091
]
102577062 (SIGLEC1)
CD molecules [BR:
amj04090
]
Proteins
102577062 (SIGLEC1)
Lectins [BR:
amj04091
]
I-type lectins (Siglecs)
102577062 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
V-set
ig
Ig_4
Ig_5
Izumo-Ig
Ig_CD22
C1-set
C2-set_2
Ig_6
RGI_lyase
Motif
Other DBs
NCBI-GeneID:
102577062
NCBI-ProteinID:
XP_019353956
LinkDB
All DBs
Position
Un
AA seq
1691 aa
AA seq
DB search
MPFILQLLLLAHHVLQALGSWGVTSPESLRGVRGSCVVMPCTFSYPDSVSATQGIVAIWY
KDFDGQRTTVYHSAAPEEVDAGFRDRTQLIGDPAALNCTLLLRDVGVGDNDKYKFRFEIV
GGDRWVDARGVVLTVTDVPDSPTIASVEEVMEDTTVSFVCSSPYVCPYDSIALQWSGYNQ
EASTVSGTMQLDTSGTQSQQTLTTSFSWKDHKKKLQCELSVGSLRAAGEITVKVKHAPKG
VEALISPATKNIRVGDSVSLTCHVNSSHPEVTTYRWFKNRAALSGNQILTFHSVTRADYG
LYYCEVENPIGMTAAKAVTLNIFSAVISASPATASREGSTVTLTCDVPGEERQDLSYTWY
KNNVWLKEGAARALVFLAVATSDTGYYSCKVQNDKGSEMSQAISLTVLYPPRTPAITLFQ
DMQEGKLAIVHCMVDSHPSSKLSLYRDKVLLATTDSHAAPNQRVSITASRNSLKLEIHHV
QPEDDGEYECTATNDYGTSTASQKFLAQAARVLISPSAEVREGEAVTLTCVATQGTEEGT
IYTWYKNGQWLSEGPMKTLTFPSVSSGDAGAFHCKAQGIRGSNTSPANTLRVLFPPRQPV
MSSLLETQDGQLGIIQCVVESDPQADLSLFKGGELVASACGCHSKARHRARVTPSHNSLK
MEIQDVVLEDEGTYMCQAINTYGNSSVSMDFTAETAKIAVAPSSEVQEGQGVNLTCYLSS
SSANTANYSWYRNGQQVTEGPASALVFQQVKSTDAGIYYCKAVMNQTSKSSSTVSLNVLY
APRNLHVTSFQETERGRLAIIHGVVESNPPAQLSLYKGQDLVGSTSSQPAATSRVSVAAA
QNSLRVEIQDVRLEDEGNYHFTASNAYGSTSSHLYFRVQTARVLATPATEVQEGDAVSLT
CDVMGSPPEDTVYTWYRNSKRLHEGPDSSLAFPHITSQDAGSYHCRAHSPEAASSSAAPS
IVLHVFYPPRKPQMTSFLETQDGQLGILQCTVDSDPQAELSLLRGEELIASTTISQSVAG
QRVKVSSTYNHLKVEIPAVVMEDEGEYVCAASNAYGNASSSMNFTAETARVWISPSPDVH
EGDAVNLTCAVDSDAQEIPHYTWYKNNIWYSEGPARSLAFPKVAVADAASYHCTVKTPER
VRSSSPGTLNVFYPPRTPLVKAFLDAQDGKSAIIICAVSSNPPSEITLTRASELVASSSS
RGTRTPRQRLRVSSSPNSLKLEIQDVTLEDEGEYECSAANGLGEASAFVSLRVQTVRVVV
QPAPEAQEGDLVTLTCEDTQAQPSTVYTWYKNAAWLAEGTARSLVLQGVAGSDAGSYSCR
AQTDGGSQASLPITLRVLYAPRKPSMSSFLDTQDGHQAILHCTVDSEPPSDLVLYRRDNL
ALMASTRASHGPSNPWLSIHQSHNSLKVEMKDVGLGDEGQYVCLANNTYGIAMTSVHLHV
ETVRITVDPSPEVHEGATVNVTCEVALRVAGDMNFTWYKNSKWLQDGPMGSLLLRHVSSA
DAGSYHCRVEGRGGGATSALVSVNVLYAPKNLVVSAFLDNQSGKVGIIRCTADSNPRAEL
ALYKEKKLLASTYAHRSAISPKTSVFPSYNTLRVEIKDLVSEDSAEYVCVASNALGNATA
SSYFSARTLSDLLVFKILTGLSIAAFCVVLLAMAMMFWPRVMEILKKKKDESAMELTSKE
QQQQPFRALIL
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcatcttgcagcttctgctcctggcgcaccatgtcctgcaagcccttggctcg
tggggggtcaccagccccgagagtctccgtggtgtgcgtggctcctgcgtggtgatgccg
tgcaccttcagctaccccgactctgtgtcggccacgcagggcatcgtggccatctggtac
aaggacttcgacggccagcgcaccacggtgtaccactctgcagcgcctgaggaagtggat
gccgggttcagggaccgaacacagctcattggggacccagctgcactcaactgcaccctg
ctgctgcgggatgtgggggtcggcgacaatgacaagtacaaattcaggttcgagattgtg
ggtggcgatcgctgggtggatgccaggggcgtggtgctgaccgtgacggacgtccctgac
agcccgaccatcgcttccgtggaggaggtgatggaggacacgaccgtgagcttcgtctgc
tccagcccctacgtctgcccgtacgacagcatcgccctgcagtggagcggctacaaccag
gaggcttccaccgtgtccggcaccatgcagctggacacatctggcacccagagccagcag
accctcaccacgtccttctcctggaaggaccataagaagaagctgcagtgtgaactgtcg
gtgggatccctgcgggccgcgggggaaattactgtgaaggtgaagcatgccccgaaaggt
gtcgaggcgttaatcagtccagccaccaagaacatccgtgtcggggactcggtgtccctc
acctgccacgtgaacagcagtcaccccgaggtcaccacttacaggtggttcaagaacagg
gctgccttgtccggaaatcaaatcctgaccttccacagcgtgacccgtgcagattacggc
ctgtattactgcgaggtggaaaatcccattgggatgacggcggccaaagcggtgactctc
aacattttctctgcggtgatctctgccagcccagcgacggcatcgcgcgaaggcagcacg
gtgacgctgacctgcgacgtccccggcgaggagcgccaggatctcagctacacctggtac
aagaacaacgtgtggctcaaggagggggcggcgcgtgccctggtgttcctggccgtggcc
accagcgacaccggctactactcctgcaaggtgcagaacgataaaggcagcgagatgtcc
caggccatcagcctgaccgtgctgtatccgcccaggaccccagccatcaccttgttccag
gacatgcaggaaggcaagctggccattgtccactgcatggtagacagtcacccttcctcc
aagctgtccctttaccgtgataaggtcctcctggccaccactgactcccacgcggcgccc
aaccagcgggtcagcatcacggcgtcccgcaactccttgaagctggagatccatcacgtg
cagccggaagatgacggcgagtacgagtgcacagccaccaatgactatggcacctccacc
gcctctcagaagtttctggcccaagctgccagggtcctgatcagcccatctgcagaggtg
cgggaaggcgaggccgtcaccctgacctgcgtcgccacccaaggcaccgaggaagggacc
atctacacctggtacaagaacggccagtggctgagcgaggggccgatgaagaccctgacc
ttcccctccgtgagcagcggggacgcgggcgctttccactgcaaggctcagggcatccga
ggcagcaacacctccccggccaacacactgcgggtgctgttccccccaagacagcccgtg
atgagctccctgctggagacgcaggacgggcagctgggcatcatccagtgcgtggtggag
agtgacccccaggctgatctcagcctgttcaaaggaggggaactggtggcctccgcttgt
ggttgtcactcgaaagcccgccaccgggcccgtgtgaccccctcgcacaacagcctgaag
atggagatccaagacgtggtgctggaggacgagggcacatacatgtgccaagctatcaac
acctacggcaactccagcgtctccatggacttcacagctgagacagccaaaattgcagtg
gccccatcctccgaggtgcaggaaggccaaggggtcaacctgacctgctacctgagcagc
agctcagccaacacagccaactacagctggtaccgcaatgggcagcaggtgaccgagggc
ccagccagtgccctggtcttccagcaggtgaagagcacggacgccggcatctattactgc
aaagcggtgatgaaccagaccagcaaaagctcctccacggtttccctgaacgtgctgtat
gccccaaggaacctgcatgtgacctcctttcaggagacggagagggggcggctagccatc
atccatggcgtggtggagagcaaccctcccgcccagctgtccctatacaaaggccaggac
ctggtggggtctaccagctcccagcctgcagccacctcgcgggtcagcgtcgcggccgcg
cagaactccctgcgcgtggagatccaggacgtccggctggaggacgaggggaattaccac
ttcacagctagcaatgcctacggctccacttccagccacctctacttccgcgtgcaaacg
gcccgggtcctcgccacacctgccacggaggtgcaggaaggggacgccgtctccttgacc
tgtgatgtgatgggcagcccccccgaggacacggtctacacctggtacaggaacagcaaa
cggctccacgagggccccgacagctccctcgccttcccgcacatcaccagccaggacgcc
ggctcgtaccactgccgggcccacagccccgaggctgccagcagcagcgctgctccctcc
atcgtcttacacgtcttctatccaccacggaaaccccaaatgacctcttttctggagacc
caggatgggcagctgggcatcctgcagtgcacggttgacagtgaccctcaggccgaactt
tctttgctcagaggagaagaactcatagcttccaccaccatctcccagtcagtggctggg
cagcgggttaaagtgtcttccacctacaaccacttgaaagtggagatcccggcggtggtc
atggaagatgaaggagagtacgtgtgtgcagctagcaacgcgtacggcaatgccagctcc
tctatgaacttcactgcggagactgcaagggtctggatctctccttccccggatgtccac
gaaggggacgcagttaacctgacctgtgccgtcgacagtgatgcccaagagatacctcat
tacacctggtataagaacaacatatggtacagtgaaggccctgccagatcgcttgcattt
cccaaggttgctgttgccgatgctgcatcctaccactgcaccgtgaagaccccggagagg
gttagaagctcttcccctggcactttgaacgtcttctatcctcccaggacccccctggtg
aaagccttcttggatgcgcaggatgggaagtcagccatcatcatctgtgccgtcagtagc
aacccaccctccgaaatcaccctgacccgagccagtgaattggtggcttccagttcgtcc
cgagggaccaggaccccgaggcagcgcttacgtgtctcatcctcccccaactccctgaag
ctggagatccaggacgtcaccctggaggacgaaggggagtacgaatgctcagctgccaat
ggccttggcgaggccagtgccttcgtaagcctccgcgtacagactgtgagagtggttgtc
cagccagccccggaggcccaggagggagatcttgtcacgctgacctgcgaggatacgcaa
gcccaacccagcaccgtttacacctggtacaagaacgccgcgtggctggcggagggcacg
gccaggtccctcgtgttgcaaggcgtggcaggctccgacgccggctcctactcgtgccgg
gctcagacggatgggggcagccaggcctccctccccatcaccttgcgtgtgctctatgcc
ccaagaaagccgtccatgagctccttcctggacacacaggacgggcaccaggccatcctc
cactgcacagtcgacagcgagcccccgtctgaccttgtcctgtaccgacgggataacctt
gcactcatggcctccacccgggcctcccatggtccgtccaacccgtggctgagcatccac
cagtcccacaactccttgaaggtggagatgaaggacgtcgggctgggagacgagggccag
tacgtctgcttggcgaacaacacctatggcattgccatgacctctgtgcatctccacgtg
gaaactgtcagaatcacggttgacccatctccagaggtccacgaaggagccacagtcaat
gtgacctgcgaggttgcccttcgggtagcaggagacatgaacttcacctggtacaagaac
agcaagtggctgcaggatggtcccatggggtcacttcttctccgtcacgtgtctagtgcc
gatgctggctcatatcactgtcgggtggaggggaggggaggaggtgccacctcagccctg
gtcagcgtgaacgtgctctatgccccaaagaacctggtggtcagcgccttcctggacaac
cagagcgggaaggtgggcatcatccggtgcactgcagacagcaaccccagggctgagctg
gccctctacaaagaaaagaagctcctggcctccacatatgcccaccgctctgccatcagc
cccaaaaccagtgtgttcccctcctacaacaccctgagggtggaaatcaaagacctcgtg
tcagaggattcggccgagtacgtgtgtgtggccagcaatgcactgggcaatgcaactgcc
agctcctacttcagtgcacggaccctctcggacctcctggtgttcaagattttgactggg
ctctccattgcggcattctgcgtggttctgctcgctatggctatgatgttttggcccagg
gtcatggagatcctgaaaaagaaaaaagatgagagcgccatggagctgaccagcaaggag
cagcagcagcagcccttcagagcccttatcctgtaa
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integrated database retrieval system
