Alligator mississippiensis (American alligator): 102577079
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Entry
102577079 CDS
T03087
Symbol
CLDN5
Name
(RefSeq) claudin 5
KO
K06087
claudin
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03272
Virion - Hepatitis viruses
amj04382
Cornified envelope formation
amj04514
Cell adhesion molecules
amj04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
102577079 (CLDN5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102577079 (CLDN5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102577079 (CLDN5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102577079 (CLDN5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102577079 (CLDN5)
04147 Exosome [BR:
amj04147
]
102577079 (CLDN5)
04515 Cell adhesion molecules [BR:
amj04515
]
102577079 (CLDN5)
Cilium and associated proteins [BR:
amj03037
]
Other cilia and associated proteins
Stereociliary proteins
102577079 (CLDN5)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
102577079 (CLDN5)
Exosomal proteins of colorectal cancer cells
102577079 (CLDN5)
Cell adhesion molecules [BR:
amj04515
]
Immunoglobulin superfamily
L1 family
102577079 (CLDN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
T4SS_CagC
Motif
Other DBs
NCBI-GeneID:
102577079
NCBI-ProteinID:
XP_019342139
UniProt:
A0A151NRN4
LinkDB
All DBs
Position
Un
AA seq
216 aa
AA seq
DB search
MASAALEIVGMGLSILGWVGVLVTCGLPMWQVSAFIEANIVVAQSLWEGLWMTCAVQSTG
QMQCKVFDSILALSPEVQAGRAITVLVALLGLVALMVTVMGAQCTNCVRPGRAKSHIALA
GGAIYVLCGVLVLIPICWFAHITISDFYDPTVPRFKKREMGASLYIGWAATALLLVGGGL
ICCGARGHKDEDAFPVKYSAPRRPTSNGEYDKKNYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccgcgctggagatcgtgggcatggggctcagcatcctgggctgggtgggc
gtgctcgtgacctgcgggctgcccatgtggcaggtgtccgccttcatcgaggccaacatc
gtggtggcgcagagcctgtgggaagggctgtggatgacgtgcgcggtgcagagcacgggg
cagatgcagtgcaaggtgttcgactccatcctggcgctgagccccgaggtgcaggcgggc
cgcgccatcaccgtgctcgtggcgctgctggggctggtggcgctcatggtgaccgtgatg
ggcgcgcagtgcaccaactgcgtgcggccgggccgcgccaagtcgcacatcgccctggcc
ggcggggccatctacgtcctgtgcggcgtcctggtgctcatccccatctgctggttcgcc
cacatcaccatcagcgacttctacgaccccaccgtgccgcgcttcaagaagcgggagatg
ggcgcctcgctctacatcggctgggcggccacggcgctgctgctcgtgggcggcgggctc
atctgctgcggcgcccgcgggcacaaggacgaggacgccttccccgtcaagtactcggcc
ccgcggcggcccacgtccaacggcgagtacgacaagaagaactacgtgtga
DBGET
integrated database retrieval system
