Alligator mississippiensis (American alligator): 102577338
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Entry
102577338 CDS
T03087
Symbol
VPS53
Name
(RefSeq) VPS53, GARP complex subunit
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102577338 (VPS53)
Membrane trafficking [BR:
amj04131
]
Protein recycling
Others
EARP complex
102577338 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
102577338 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Sec8_N
Laminin_II
O_Spanin_T7
GrpE
TPR_CAND1
hAT-like_RNase-H
Syndetin_C
NBD94
COG3_N
COG5_N
Snf7
MCPsignal
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
102577338
NCBI-ProteinID:
XP_006277723
UniProt:
A0A151NAC3
LinkDB
All DBs
Position
Un
AA seq
832 aa
AA seq
DB search
MEEDELEFADGLEDVLQLAPDVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLANI
DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRPGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPQEWYMTERIAVEFCHVTRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGCTLADGTVQKKPELPPPSMNPFLDDEPGTETDETMMEKSDIDRPKKPKVPDNPFHGI
VSKCFEPHLYVYIESQDKNLSELIDRFVADFKAQGPPKPNVDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKEKEGSE
VAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDASLMERINLTGEMDTFSIVISN
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKR
SEQSSMLELFRQRLPAPPSGMENPSSISLTAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgagctggagttcgcggacgggctggaggacgtgctgcagctggcgccc
gacgtgcagctggccatcgagcaggtgtttcccagccaagatccactggaccgggcagac
ttcaatgctgtagagtacattaatactctctttccaaccgagcagtctttggccaacatc
gatgaagtggtgaataaaatcaggctgaagataaggaggttggatgacaacatccgaact
gtggtgagaggccagaccaatgtgggccaggatggcaggcaggctcttgaagaagcccaa
aaagccattcagcaactctttggtaaaattaaagatatcaaagacaaagctgaaaaatca
gagcaaatggttaaagaaattacacgagatatcaagcagctggatcatgccaagcgccat
ctgaccacctccatcacgaccctcaatcacctacacatgctggcgggcggtgtggattca
cttgaggcaatgaccaggagaaggcagtacggggaagttgccaatctcctgcaaggtgtc
gtgaatgtgctagagcatttcaacaagtacatggggattccgcagattcgacagctttcc
gaaagggtgaaggctgcccagaacgaactaggacagcaaatcctggcagattttgaagaa
gcttttccttctcagggcacaaagagaccaggagggcccagcaatgtcctccgtgatgca
tgtctagtcgccaatgtcctggatcccagaatcaaacaggaaatcatcaagaagtttatt
aaacagcacctctcggaatacctggtacttttccaggaaaaccaagatgtggcctggctc
gataaaatcgacaggcgctacgcttggataaaacgccagctggtggactacgaggagaag
tatggccgcatgtttccccaggagtggtacatgacggagcgcattgccgtggagttctgt
catgtcacaaggacagagctggctaagatcatgcgcacaagagctaaggagattgaggtg
aagttgcttttgttcgccattcagagaaccaccaactttgaaggactgctggctaagcgc
ttctcaggttgcacgctagccgatgggacggtgcagaagaagccagagctgccgcctccc
tctatgaacccatttctggatgatgaacctgggacggagacggatgaaaccatgatggag
aaaagtgatatagacagaccaaagaagccaaaggtcccagacaacccatttcacggcatc
gtttccaagtgctttgaacctcacctgtatgtgtatattgagtcccaggacaaaaatctc
agcgagctgattgacaggtttgtggctgatttcaaggcccagggtcctcccaagcccaac
gtggatgaggggggagctgtcctgcccagctgtgctgacctctttgtttattacaagaag
tgcatggtgcagtgttcgcagctcagcacgggcgagcccatgattgcactgaccaccatc
ttccagaagtacctccgggaatacgcctggaaaattctctctggaaatctgcccaaaaca
accagcagcagcggtgggctgaccatcacgagtctgctgaaagagaaggagggctcggaa
gtggcgaagttcactttggaagagctctgcctgatctgcagcatcctgagcacggcagag
tactgtctggccacaacccaacagcttgaagaaaagctcaaagaaaaggtggatgcaagt
ctcatggaaaggatcaacctgacgggggagatggacaccttcagcattgtgatctcaaac
agcatacagctgttggtgcaagacttggatgcagcctgcgacccggcgcttacagctatg
agcaagatgcagtggcagaacgtggaacatgttggtgaccagagtccatacgtcacttcg
gttattcttcacattaagcagaacgtccccatcatccgtgacaacctggcatccacaaga
aagtacttcacccagttctgcattaaatttgcaaactccttcattcccaagttcatcaac
cacctattcaagtgcaaaccaattagcatggtgggagcagaacagctcctgctggatact
cactctctgaagatggtcctcttggatctgccttccatcgggtcccaagtggtgaggaaa
gcacctgccagctacaccaagatcgtcgtgaagggcatgactcgggcagagatgatcctg
aaggtggtcatggcgccccacgagcccccggtcgtgtttgttgacaattacatcaagctc
ctcgccgactgcagcacagacacgttccagaagatactggacatgaagggcctaaagaga
agcgagcagagcagcatgctggagctgttccgccagaggctccccgcccctccctcgggg
atggagaaccccagctccatctctctgacagcaccgacgcctgagcaggagtcctcccgc
atacggaagctggagaagctcatcaagaagagactgtag
DBGET
integrated database retrieval system
