Alligator mississippiensis (American alligator): 106736706
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Entry
106736706 CDS
T03087
Symbol
TMC3
Name
(RefSeq) transmembrane channel like 3
KO
K21988
transmembrane channel-like protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amj02000
]
106736706 (TMC3)
03037 Cilium and associated proteins [BR:
amj03037
]
106736706 (TMC3)
Transporters [BR:
amj02000
]
Other transporters
Pores ion channels [TC:
1
]
106736706 (TMC3)
Cilium and associated proteins [BR:
amj03037
]
Other cilia and associated proteins
Stereociliary proteins
106736706 (TMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
106736706
NCBI-ProteinID:
XP_006274095
UniProt:
A0A151M9D8
LinkDB
All DBs
Position
Un
AA seq
1118 aa
AA seq
DB search
MSGSATMKTTKSCKRYKSVKRHSSIYTYQEPPHSNSDDDNGDEKVDSKDPEQIFQNIQFQ
KETVANIRCRPWPMRQKLRALRQAKEIVLKYEGRLTRTRGYQAAGAELWKKFVRLAYNFL
VIFVPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELLAGVPFGNK
TIPTEQLATAQDLDTIWSLGGYLQYSVLFYGYYGRDRKIGKAGYRLPLAYFLVGMAVFAY
SFIILLKKMAKNSRMSLASASDENYTFCWRVFCAWDYLIGNPEAAESKAAAIVNSIREAI
LEEQEKKKSKNLAVTISLRIIANILVLLSLAGSIYIIYFVVDRSQKLERTKKELTLWEKN
EVSVVVSLITMLAPSAFELVAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIALLDKVDS
MSIAEFEANSSASYWIPSTTTLITKKLFQENLSTMVPDINGSRNSTFSLEDSRTPNYATP
VTPLNQTVSYAYNTHNNPNQCWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLFVRYLS
DCWCWDLESKFPEYGEFKIAENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSW
AVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIARYKPSLSCGPFSGQEKIY
DIVSETIKSDFPAWFNAVLTYVSSPVVVLPALLLLFMLIYYLQSIARSLKFTNNQLRLQI
QTERTEDKKKVVQMAVARIQNLEGNDKRPDQESDVISQESSVRSSTPRKNGSVLNFESPV
NKGSRIQTISQSVLQADVARPANITPATSTPLTPTPTVPSVQKPRAEQVANRYSSVVHGS
ASDLCKTKPYTPVAFKKHVEDVHSEPLFRKGIRQINPDAVGAGAPVFVGHRAHTTRYFIV
NEHESRKKLLRSTSRLPRHFRMDESGDIIELYPRNVRRYVVRTPLRTYSPHFSEEEEEEE
ELRRDLVNRSHRPRSLSDLRAAPRFYIGERADSQILTSKDLSKVHYKSWDDGFELELERP
PHSYKKPHTKNVELDKHYPEHHVKPKSKHKLEHSLTESDSISVGSSSDQQNSSNDQYIQV
IHSKDKYLKSGTKLTRKKSKTSVDLNMSEPNELICSNV
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatctgctaccatgaaaactacaaagtcctgcaagaggtacaaaagtgtgaag
cggcactccagcatctacacataccaggagccaccccacagtaactcagacgatgataat
ggtgatgaaaaggttgacagcaaagacccagaacagatcttccagaatatccagttccag
aaggagaccgtggcaaacatccgttgtagaccgtggccaatgagacagaaactacgggca
ctcaggcaagcaaaagagattgtgctgaagtatgaagggaggctcaccagaacaagaggc
taccaagcagctggtgctgagctctggaagaagtttgttcggcttgcatataattttctg
gtgatttttgttccttgggaaatgagaataaagaaaatagaaagtcattttggatctgga
gttgcctcctacttcatctttctgagatggctatttggaatcaatattgtgcttaccata
atgacaggagcatttgtagtcttaccagagctcctggcgggagtgcccttcggcaacaag
accattcccacggaacagctggcaacagcacaggacctggacaccatctggtctctgggg
ggttacctccagtactctgtcttgttttatggctactatggccgggacaggaagatcggg
aaagctgggtatcggctgcccctggcctatttcctggttggaatggcagtgtttgcttat
agcttcatcattctattaaagaaaatggcaaagaactccagaatgagtctggcaagcgcc
tctgatgaaaattacactttttgctggagagtgttctgcgcttgggactatttaatagga
aatcctgaggctgcagaaagcaaagcagctgccatagttaatagcatcagggaagctatt
ttggaagagcaggaaaagaagaaaagcaaaaacctggcagtgacaataagcttaaggatt
attgcaaacatccttgtgctgctttccctcgctgggagtatctacattatttactttgtg
gtggatcgatcccaaaagctagaacgtaccaaaaaggaactgacactctgggaaaaaaat
gaggtgagtgttgttgtttcgctaattactatgcttgcgccctctgcatttgaacttgtg
gcagcgctggagatgtatcaccctcggaccactcttcgctttcagcttgccagggttctt
gttttatatctggggaacctttacagtttaatcattgctctgttggataaagtggatagc
atgagcattgctgaatttgaagctaacagcagtgcaagttactggataccttccaccact
actttaatcaccaaaaaacttttccaagaaaacttatctacaatggtccctgatataaat
ggcagtagaaacagcacgttcagtttggaagacagtcgcactccaaactatgcaacacca
gtcacaccacttaaccagacagtttcctatgcctataacactcataataatccaaatcag
tgctgggaaacatatgtcggtcaagaaatgctgaagctgtccattatcgacatgattttc
acagtggcaagcattctgttaatagactttttccgtggactttttgtcagatatttaagt
gattgctggtgctgggatctagaaagcaaatttccagaatatggagaattcaaaattgct
gagaacgtgcttcatttggtatacaatcaaggaatgatttggatgggagccttcttttca
ccctgcctcccagcattcaatgttcttaagttgattggtctgatgtacctgagaagctgg
gcagtgttaacttgtaatgtaccacatcaacaggttttcagagcttcaagatccaacaac
ttctacttagctatgttgctgtttatgttgttcctgtgcatgctaccaacaatttttgct
attgccagatataagccatctttaagctgtggtccatttagtggacaagaaaaaatatat
gatattgtgtctgaaacaattaaaagtgattttcctgcatggttcaatgcagtgcttact
tacgtcagcagtcctgtagttgttctccctgcattattactcctgttcatgctaatttat
taccttcagagtattgcaaggtcattaaaattcaccaacaatcaactgagattgcagatc
caaactgagagaactgaagacaagaaaaaggtggttcaaatggcagtagccagaatccag
aatctggagggaaatgacaaaagaccagaccaggagagtgatgtcatcagtcaggaatct
tcagttcggtcatcaacacctcgaaagaacggcagtgtcttgaattttgaatccccagtg
aacaaaggcagcagaatacaaaccatctcacaatctgtactacaagctgatgttgctagg
ccagcaaatattactccagcaacttcgacccctttaactccaactcccactgttcccagt
gtacagaaacccagagctgagcaggttgcaaatcggtattcaagtgttgtacatggcagt
gcaagcgatctctgtaaaacaaagccctacactcctgtggctttcaaaaagcacgttgaa
gatgttcactctgaacctctctttagaaaaggcatccgacagataaatccagatgctgtt
ggggcgggggctccagtgtttgttggacacagagcacacaccaccaggtattttattgtt
aatgaacatgaatcccgcaaaaaacttctccgttccacttcccggctgccaaggcatttc
cgaatggatgagtcaggagacataattgagctatatccaagaaatgtcagaagatacgtg
gttcgaacaccactcaggacatattcccctcacttcagtgaagaggaggaagaagaggag
gaattaaggagggacttggtaaacagatcccaccgtccacgttcactctcagatctccgt
gcagctccccgattttacattggggaacgtgctgacagtcaaattcttactagcaaggat
ctctccaaagtgcattacaagtcctgggatgacggctttgagctagagctagaacggccc
ccacactcctacaaaaagccacacacaaaaaacgttgaacttgataagcactatccagag
catcatgtgaaacctaaatccaagcacaagcttgagcactctctaactgagtcggattcc
atttccgttggctctagcagtgaccaacaaaacagtagtaatgatcaatacattcaggtc
atacacagtaaggacaagtacctgaaatctgggacaaagcttaccagaaagaaatcaaag
actagtgttgacctaaacatgtctgaaccaaatgaactgatctgttcaaatgtctaa
DBGET
integrated database retrieval system
