Alligator mississippiensis (American alligator): 106736709
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Entry
106736709 CDS
T03087
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha 1
KO
K05637
laminin, alpha 1/2
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04510
Focal adhesion
amj04512
ECM-receptor interaction
amj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106736709 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106736709 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106736709 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
EGF_laminin
Laminin_G_2
Laminin_B
Laminin_N
EGF_LMN_ATRN
Laminin_I
Laminin_II
Laminin_G_3
Hepar_II_III_C
TS_C
Motif
Other DBs
NCBI-GeneID:
106736709
NCBI-ProteinID:
XP_006263001
UniProt:
A0A151NFG0
LinkDB
All DBs
Position
Un
AA seq
3096 aa
AA seq
DB search
MGLSRRAHRGLLLAAAIWALGRCQLRGLFPAILNLASNAHITTNATCGEQGPEMFCKLVE
HVPGRPLRNAQCRVCDNNSPNPKEQHPISSAIDGTNNWWQSPSIQNGREYHWVTITLDLR
QVFQVAYVIIKSANAPRPGNWILERSVDGTKFTPWQYYAISDTECLTRYNITPRLGPPTY
KRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSPKLLEFTSAQYIRLRLQRIRTL
NADLMTLSHHDPKDVDPIVTRRYYYSIKDVSIGGMCICYGHARSCPLDETAKKLQCQCEH
NTCGESCNECCPGYHQKPWRPGTISAGNTCEKCNCHNKAQDCYYSQSVADQNRSINIHGQ
YIGGGVCISCTQHTTGINCEICADGYYRPHKVSPYEDNPCHPCDCDVFGSLSSSCTKDDD
HSDLHQGTQPGQCECKEGYSGEKCDRCAFGYRGYPKCVRCNCSMVGSINDDPCTEPCFCK
ENVEGENCDRCKAGFYNLQERNPQGCTECFCFGVSDVCDSLAWPISQVSDMGRWLVTDLY
NPNTVQPQQGQLDRSHQISINNTMAMKILKPTYYWSAPEPYLGNKLTAFGGYLKYTVSYD
IPMESVDSDIVSSVDIIIQGNGQFLNTRAEGLSLQPYEEYSNAVHLVPDNFIDFNTKRAI
DRDRLMSVLVNVTHLLIRASYNIAKRAIYRLDSVTLDSAGANVIDLSSAADVEHCECPQG
YTGISCESCLPGYYRVDGILFGGICQPCECNGHANECDIYGVCFACQHNTTGPFCDQCLP
GFYGTPSRGTPGDCQPCACPLRMNTNNFSPTCHLGKGGDVICDKCRPGHTGSQCERCANG
YYGNPLVPGQTCVPCDCNRNVDPLEDGHCDAVTGECLKCVGNTMGHHCEKCADGYYGDAV
ITKRCHVCECHLNGSLSSICHHETGFCYCKPNVTGQRCDKCLNGYYGLNTGLGCLPCGCS
QSGSVSEDCNDEGQCHCVLGVAGEKCDRCAQGFHTFQDGGCTPCNCPHTQNNCDADSGQC
ICPPHTEGPKCELCKENYWRHDSELGCKACNCSAVGSASLQCDLLTGQCQCKSEFGGKDC
SRCALGYRDYPDCVSCDCELSGTKADQCEEGQGICTCEEETGICACKENVFGLHCSECKT
GTFALQASNPVGCTPCFCFGMSEFCSELENHARIPVTLTPDQSILHVVSQSNLTGTKEGV
FSQFHDVLLDAATVRQHLNTEPFYWRLPDQFQGDQLMAYGGKLKYTVAFYALDGFGTSNF
EPQILIKGGHTSKLVIYVDISAPENRVRHHQEVEIKEHFWKYFNSVSDQPVSHSDFMSVL
SNVEYVLIKASYGQGLQQSRIANISMEIGMKIEDMHLGRERAHLIEQCECPPGYAGFSCQ
SCALGYYREKHADLNVKEPRPLIMPCVPCQCNNHSEICDLETGKCLNCRDNTTGDHCGAC
APGYYGKVLGSVRDCSLCACPRANTISFSPTCVLKDVDDYHCDACLTGYEGQYCERCSLG
YYGDPEAPGGSCQQCQCYPDGSVDNNCDRITGKCICKQGVAGQLCDECEPRHILVENECL
SCDDDCTGVLLDDLVNLDKAIFSVNLTDVVLAPYGKLSELENTTKQFKRVLLPREDPLHS
IQTAKEHLMSISGRTDQLQKELTRMLERGWQLNSSTQRNMNRSQELTVSIETVYTTIKVL
AEVATSLNETLGLDFQLSNSTTQSLLENISTLLETMHKRHFREQHQNANAVLKAAERLLL
RVQKEYHRPQQEFAELKKDTSDLLSNHMSRLQEAQDLVNEAHANTNEMNRLLPLIYSNLA
ELNNKKLNINEENDLSNMLIKEGKALVDVAARLATDVKNSTSNLDLQRDGLILWNAKLRH
HVDDLVMQMSMRRMLDLVYRAEDHAAELQRLADVLDSGLSNVRNVSLNATSTVYAHPNIK
SLIESTESLADDASRIIIDPLDLPGESFDSLGKDTLLLSSKFLNEAKNLKRKNDGLVSGL
NGLREKVQKVREGSHKIAKQLKVSVTALKALPNDTSEIIVEAKEMAMAANKSDVTGVSHI
VDFTQKLMNTSSALSRVNDTLRKTSELIMDSSKAATSAEQQVKEVEAQANLLFDRLKPLK
RLEENLSRNLSEIKELISQARKQAASIKVAVSADRDCIRAYQPQISSSNYNTLTLNVKTI
EPDNLLFYMGSNGNNDFIAVEMRRGRVAFLWDMGSGSTRVEYPDFKIDNNKWHRIHATRF
GKTGTLSVEEVSSTQKPLTKTATSPGTATVLDVNKSTLIFVGGLGGQIKKSPAVKVTHFK
GCMGEASLNGKSIGLWNYIEREGKCNGCFGSPQDEDTSFHFDGSGYSVVEKALRSTVTQI
IMFFSTFSPNGLLLYLASNGTRDFLSLELVDGKVRLTVDLGSGPLTLSTENRYNNGTWYK
ISFSRNKKQGVLAVMDAYNLNYKETKQGESPGVASDLNRSDKDPIYIGGLPRTRAVRKGL
SSRTYVGCIKNLEISRSTFDLIRNSYGVRKGCILEPIRSVSILNDGYIELEPKPLSPETE
LMATFATKNSSGIILAGLNKGAGKRQRRQAHLPFFSIILIDGHLTVHVNAGDRASTKKVI
LQSANGTYRDGQEHSVILIRNKRMITVQVDESNPAEMRLSSSAEISPMNISNFYVGGVPA
GEGILGLKMTGSFYGCISNLIFNKELLDFTTAVRYQHVDMGNCLLSEKPKPAIHPEDIEI
QPDLQALPVPLRPLPDNKKAQCAQDEMPDHVPGAHQFGLARGSHLVLIFNPSTVRRKLSV
QLNLRTYASSGLICYMAHQNQVDYAALQLLGGQLYFSFDLGKGKAVTFHPVIISDGKWHM
IKAEYVKRKGIIIVDGQESAAVIALGDGNTLDVEGKLYLGGLPLDYTAKNIGNVTNSIPA
CVGSVMVNNKPLDKESPVSIFAVNKCYATAQEGTYFDGSGFAALVREGYKVRSDMNVTFE
FRTTAANGVLLGISSAKVDAIGLEIVNGKVLFHVNNGAGRITATYETRDANSLCDGKWHK
LQANKSKHRIALIIDGNVVQADNPHIQSTSADTNNPIYVGGYPTDVKQNCLTSKSSFHGC
LRNLMLIKGQQVESFDFSKAFDLRGVFPHSCPGPER
NT seq
9291 nt
NT seq
+upstream
nt +downstream
nt
atggggctgagccgccgcgcgcaccgcgggctgctgctggccgccgccatctgggcgctg
gggcgctgccagctccgaggtttgtttccggctattttaaatctggctagcaatgctcat
atcaccaccaatgctacctgtggcgagcagggacccgagatgttctgcaaactggtggaa
catgttcctggtcgacctctacgcaatgcacagtgccgtgtctgtgacaacaacagtcct
aatcccaaagaacagcaccctatctccagtgctatagatggtacgaataattggtggcaa
agtcccagcattcagaatgggagggaatatcactgggtcaccatcaccctggatctaaga
caggtcttccaagttgcatatgtcatcatcaaatctgctaatgctccccgacctggaaac
tggattttagaacgttctgtagatggcacaaagttcacaccatggcaatactatgcaatt
agtgacacagaatgcttaactcgttataatattacaccgagacttggacctcctacttac
aaaagagacgatgaagtgatctgcacctcttattattccagactagttccactggaacat
ggtgagatccacacatcacttatcaatggtagacctagcgctgatgacccttcaccaaag
ctattggagtttacttcggcacaatacatccgtcttcgcctgcagcgtatcagaaccctt
aatgctgatcttatgactcttagccaccatgatcctaaagatgttgatcccattgttacc
agaaggtattactattcaataaaagatgtctccattggtggcatgtgtatttgctatggc
catgctcgaagttgcccactggatgaaactgcaaagaaactgcaatgccagtgtgaacat
aatacatgtggagagagctgtaatgagtgttgccctggctaccaccagaaaccatggaga
ccaggaaccatttctgctggtaacacatgtgagaagtgcaactgtcataacaaagcacaa
gattgttattatagccagagtgttgcggaccagaacagaagtataaatattcatggccag
tacatcggcgggggagtctgcataagttgtactcaacacactacaggaatcaactgtgaa
atctgtgctgatggatattatagaccacataaagtttctccctatgaggataacccttgc
catccctgtgactgtgatgtgtttgggtccctgagttccagctgcactaaggatgatgat
cattctgaccttcatcaggggactcagccaggtcaatgtgagtgcaaagaaggttactca
ggagaaaaatgtgatcgttgtgcatttggctacaggggctacccaaaatgtgtgcgctgt
aactgcagcatggttggcagtatcaacgatgacccatgcacagaaccttgtttttgcaaa
gagaatgtagaaggtgaaaactgtgaccgctgcaaagcaggattctacaatttgcaagaa
agaaatcctcagggctgcacagagtgtttttgctttggggtttctgatgtctgtgacagc
cttgcatggcccatcagtcaggtgtcagatatgggtaggtggttggtgactgatctgtat
aatccaaacactgtacagcctcagcaaggtcagcttgatagatcacatcaaataagtatc
aacaatacgatggctatgaaaatactgaagcccacttactactggtcagcacctgagcca
tatctaggaaataaactaactgcatttggtggatacttgaaatacactgtatcttatgac
attccaatggagagtgtggatagtgatatagtgtctagtgtggatataatcattcagggc
aatgggcaatttctgaataccagagcagagggcctgtcattacagccatatgaggaatac
tctaatgcagtgcatcttgtacctgataacttcatagattttaatacaaaaagggctata
gatcgggacaggctgatgtctgttttagtaaatgtaactcatcttctgattagggctagc
tacaacattgcaaaaagagccatatacaggctggactctgtcaccttggattcagcaggt
gctaatgttatagatctttcttcagcagcagatgtggaacactgcgaatgtcctcagggt
tacacagggatttcctgtgagtcctgtcttcctgggtactaccgcgtagatggaattctc
tttggagggatttgccaaccttgtgaatgcaatggccatgcaaatgaatgtgatatctat
ggggtttgctttgcctgtcaacacaacactacaggacctttttgcgatcagtgcttgcct
ggcttctatggcactccatcccgaggaactcctggagactgtcagccctgtgcctgtcct
ctgagaatgaatacaaacaatttcagtcccacctgccacttaggaaaaggaggcgatgtt
atctgtgacaagtgtcggccagggcatacaggatcacagtgtgaaaggtgtgctaatggt
tattatggaaatccactggtacctggccagacatgtgttccttgtgactgcaacaggaat
gtagatcctctagaagatggccattgtgatgcagtcacaggagaatgtttgaagtgtgtg
gggaacacaatgggccatcactgtgagaagtgtgctgatgggtactatggggatgcagtg
atcactaaaagatgtcatgtctgtgaatgccatctgaatggttcactttccagcatttgc
catcatgagactggcttctgttactgcaaaccaaatgtgactggacaaagatgtgataaa
tgcttgaatggttattatggcttgaatactggacttggctgccttccttgcggttgtagt
caatctggatcagtctctgaggattgtaatgacgagggccagtgtcactgtgtactagga
gtggctggggaaaagtgtgatcgctgtgctcagggcttccatacattccaggatggtggt
tgtacaccttgcaattgtcctcatactcagaacaactgtgatgcagattctggccaatgt
atctgcccccctcacacagaaggaccaaaatgtgaactctgtaaggaaaactactggaga
catgattctgagcttggctgcaaggcctgcaattgcagtgctgttggttcagccagtctc
cagtgtgatttactgactggtcagtgccaatgtaaaagtgaattcggaggaaaagactgc
tccaggtgtgctttaggctatagggattacccagattgtgtttcttgtgactgtgaattg
agtgggaccaaagcagaccagtgtgaagagggtcaaggaatctgcacttgtgaagaagag
actggcatttgtgcctgcaaggaaaatgtctttggattgcactgtagtgaatgcaagact
ggaacctttgctctccaagctagtaaccctgtaggatgtactccttgcttctgttttggg
atgtcagaattctgttcagaattagaaaaccatgccagaattccagtaaccctgactcca
gatcagtccattcttcatgtggtttctcaaagtaatctcacaggaacaaaagaaggtgta
ttttcgcagtttcatgatgttttattggatgctgcaactgtcagacagcacttgaataca
gaaccgttttactggagattgccagatcagtttcagggagaccaactcatggcttatgga
ggaaaactgaagtacacagttgctttttatgctttggatggctttggcacctcaaatttt
gaaccacagattctgataaagggaggtcacaccagtaaattagtcatctatgtggatatc
tctgctccagaaaacagagtgagacatcaccaagaagtagaaataaaagagcatttctgg
aaatactttaactctgtgtctgaccaacctgtctcacactccgactttatgtcagtgctt
agcaatgttgagtatgtccttatcaaagcatcgtatggtcaaggattacagcaaagcaga
attgcaaatatctcaatggaaataggaatgaaaattgaggacatgcatttgggcagagag
agagcacatctcatagagcaatgtgaatgtccacctggctatgctggattttcgtgtcag
agctgtgctcttggatactacagggaaaaacatgcagacctgaatgtaaaagagccacgt
ccattgataatgccgtgtgtaccatgtcagtgcaataaccatagtgagatctgtgacttg
gaaacaggaaaatgcctgaactgcagagataacacaactggtgatcactgtggtgcttgt
gccccaggctactatgggaaagtacttggatctgtccgtgactgttctctttgtgcctgc
cccagagccaacaccattagctttagtcctacttgtgttctgaaagatgttgatgattat
cactgcgatgcttgtctcactggatatgaagggcagtactgtgaaaggtgttctctaggt
tattatggagatcctgaagcacctggtggcagctgtcagcagtgtcagtgctatccagat
ggttctgtcgacaataattgtgatcgtataactggaaagtgcatctgcaagcagggtgtg
gcaggacaactctgtgatgaatgtgaaccaagacacatccttgtggaaaatgaatgtctt
tcatgcgatgatgactgtacaggtgtcttattagatgacttggttaaccttgacaaagcc
atattttcagtgaatctcactgatgttgtccttgccccatatgggaaattatcagagttg
gagaatacaacaaaacaattcaagcgggttttattacctagagaagatccacttcattca
atacagacagcaaaagaacatctgatgagtatatcgggacgcactgatcaactgcaaaag
gagttgactagaatgttggagagaggctggcaactcaacagcagcactcaaagaaacatg
aacaggagtcaggaattgactgtatctattgagacagtgtatacaaccatcaaagtcctt
gctgaagtggctacatcattaaatgagacattgggtctggatttccagctgtcaaacagc
acaactcagagtttgctggagaatatctctaccctgctggaaacaatgcataaaaggcat
ttcagggagcagcaccaaaatgccaatgctgtactgaaagctgcagaaaggttgttgcta
cgggttcagaaagagtatcacagaccccagcaagaatttgcagaactgaaaaaagataca
agtgatctcttgtcaaaccacatgagcagactacaggaagcccaggacttggtgaatgag
gctcatgctaacacaaatgagatgaaccgtctgcttccccttatctatagtaacctggca
gaattaaataataaaaagctaaacataaatgaggaaaatgacctttccaacatgctaatt
aaggaagggaaggcattggtggatgttgctgcacgtcttgccacagatgtaaagaactct
acatcgaatctagatctccaacgagatgggctgattctctggaatgcgaaattgcggcat
catgtggatgacctggttatgcagatgtccatgagaagaatgcttgacttagtctacaga
gcagaggatcatgcagctgaacttcaaagacttgcagacgttttagacagtggcctttca
aatgtaagaaacgtatctttgaatgcaaccagtactgtctatgcccatcccaacattaaa
agtttgattgaaagtacagagagtctagcagatgatgcttctcgaattataattgacccc
ttggacctgccaggcgaatcttttgattctcttgggaaagacaccttactgcttagttcg
aaatttctaaatgaagcaaaaaatctgaagaggaaaaatgatggccttgtgtctggattg
aatggattgagggaaaaggtacaaaaggttcgggagggttctcataagattgctaagcag
cttaaagtttcagtgacagcactgaaagcactacctaatgataccagtgaaataattgtt
gaagcaaaagagatggctatggctgcgaacaaaagtgatgttactggtgtaagccatatt
gtggattttactcagaagctgatgaacacttcatctgcattgtccagagttaatgacaca
ttgcggaaaaccagtgaacttataatggactcatcaaaagccgcaacctcagctgaacaa
caagttaaagaagtagaagcacaagccaatcttttatttgataggctgaaaccgctgaaa
aggctagaagagaacctgagcagaaatctgtctgaaataaaagaactcatcagtcaggcc
cgcaagcaggcagcatctattaaagttgcagtatcagcagacagagattgtattcgtgcc
taccagcctcagatttcatcctctaactacaacaccttaacattaaatgttaaaacaata
gaacctgacaaccttcttttctatatgggtagcaatggaaataatgactttatagcagtg
gagatgcggcgtggtagagtagcctttctttgggatatgggctctggatcaacaagagtg
gagtatcctgattttaaaattgacaacaacaagtggcacaggatacatgcaaccaggttt
ggaaaaactggtacactgagtgtagaggaagtgagctccactcagaagcccttaactaaa
actgcaacctctcctgggacagctactgtactggatgtaaacaaatcaacactgatattt
gttggtggacttggagggcaaatcaagaaatcaccagcagttaaggtgactcatttcaaa
ggatgcatgggagaggcatccttgaatggcaaatctattggtctttggaattacattgaa
agggagggtaaatgcaatggatgctttggaagccctcaggatgaagacacttcattccat
tttgatggcagtggatattcagttgtggagaaggcgctccgctccaccgtgactcaaata
ataatgtttttcagcaccttctcccctaatgggctcctgctgtatcttgcttctaatggc
actagagatttcttgtctctggaacttgttgatggcaaagtgagactgactgttgatctt
ggttcaggaccacttactctttcaacagagaatcgttacaataatgggacatggtataaa
atttcattcagccgcaacaagaaacaaggagtattggcagtcatggatgcgtataacctt
aattataaggaaaccaagcaaggagaatcccctggagtagcctcggacctcaatcgttca
gataaggacccaatttacattggtggactaccaagaacaagggctgtgaggaaaggactt
agcagcagaacatatgtaggttgtattaagaacttggaaatatcccgctctacctttgat
ttgattagaaactcatatggtgtgagaaaaggctgcatattggagcctatccgtagtgtc
agcatcttgaatgatggctacattgaattagagcctaagcccctatctcctgaaacagaa
ctaatggcaacttttgctactaagaacagtagcggaatcatccttgctggtctcaacaag
ggagcagggaagcgacaacgcagacaagcacatttgcccttcttttccatcatactgatt
gatggtcatctcactgtgcatgttaatgcaggggacagagcaagtaccaaaaaagtcatt
ctccagtctgctaatgggacatacagagatggacaagaacactctgtcatcctgatccgg
aataagaggatgataactgtacaagtggatgaaagtaaccctgcagaaatgagactcagc
tcatcagcagaaattagtcctatgaatatttccaacttctatgttggtggggtgccagca
ggcgagggcatcttagggttgaagatgactggatctttttacggatgtataagcaatctg
atttttaacaaggagcttttggatttcaccactgctgtgaggtatcaacatgtggacatg
ggtaactgcttgctttcagagaagcctaaaccagcaatacatccagaagatattgagatt
caacctgaccttcaggctttgccagttcctctaaggcctcttccagataataagaaggca
cagtgtgcacaagatgaaatgccagatcatgttcccggtgcccaccagtttggacttgcc
agaggcagccatttagtactgatttttaatccgagtactgtcagaaggaaactctctgtt
cagctgaacctcagaacctatgcttctagtggcctgatttgctacatggctcatcagaat
caagttgattatgcagcccttcagcttctggggggacagctatatttctcatttgatctt
ggaaaaggaaaagcagtgacttttcaccctgttatcatcagtgatggaaaatggcacatg
ataaaggcagaatatgttaaaaggaaaggcataatcatcgttgatggtcaggagtcagca
gcagttattgctctgggagatggcaacacgctggatgttgaagggaagctctatctggga
ggacttcccttagattatacagctaagaatattggaaatgtcaccaacagtatccctgca
tgcgttggcagtgtaatggttaacaataagccactggacaaagaaagcccagtctccatc
tttgctgtgaataaatgctatgcaacagcacaggaaggcacttacttcgatggaagtggc
tttgctgctcttgttagagaaggttataaagtccgatctgatatgaatgttacatttgag
ttccgtaccactgccgcaaatggagttcttcttggaattagcagtgctaaagtagatgcc
attggattggagattgtaaatggcaaggttttgttccatgtcaacaatggagctggcaga
ataacagccacatatgaaacaagagatgcaaatagcttatgtgatgggaagtggcacaaa
cttcaagcaaacaaaagcaaacatcgaattgctctgataattgatgggaatgtggtccag
gccgataatcctcatatccagtcaacatctgcagatacaaacaatcctatttatgttgga
ggctatcccactgatgtgaagcaaaactgtctgactagcaagagctcattccacgggtgt
ttgcgaaacctgatgttgatcaaaggccaacaggtagaatcctttgacttcagcaaagcc
tttgacctgcgtggagtctttcctcattcctgccctggacctgaacgctaa
DBGET
integrated database retrieval system
