Alligator mississippiensis (American alligator): 106736715
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Entry
106736715 CDS
T03087
Symbol
SIN3A
Name
(RefSeq) SIN3 transcription regulator family member A
KO
K11644
paired amphipathic helix protein Sin3a
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106736715 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
106736715 (SIN3A)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
106736715 (SIN3A)
REST complex
106736715 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
106736715 (SIN3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
106736715
NCBI-ProteinID:
XP_006265497
LinkDB
All DBs
Position
Un
AA seq
1279 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRITSSTEAFQHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIATVHSGHHHTTPVQPHGSQVVQSHAHPTPPAAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQSQHQSQPSAQSTPTPAQ
PAPQPPPAKISKPSQLQAHTPASQQTPPVPPYASPRSPPVQPHTPVTISLGTTPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKPQRP
NQNGCQIRRHSGTGATPPVKKKPKLLGLKDQSLAEASKHGGGTESLFFEKVRKALRSTEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSL
AYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICTQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYY
PAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENNNGATGGLLTTQSSRTLLEATYQRKAEQLMSDENCFKLMFIQSRGQVQLTI
ELLDTEEENSDDPVEAEVREAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIR
KCQRGREQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLR
AQQSHERVSKRLHQRFQAWVDKWTKEHVTREMAAETNKWLMGEGLEGLVPCTTTCDTETL
HFVSINKYRVKYGTIFKTP
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgattggatgagcaggagtcacctgtgtatgcgtcgcagcagagacgtatt
actagcagcactgaagctttccagcaccagcatcgtgtgcttgctccagcacctcctgtt
tatgaggcggtttcggagaccatgcagtctgccactgggattcagtactctgtaactccc
agctaccaggtgtcagctgtgccacagagctcgggcagtcatgggcctgccatagcaact
gtccatagtggacatcatcatacaacaccggtgcagcctcatggaagtcaggtggtgcag
agtcatgctcacccaacccctccagcagcaccagtacaggggcaacagcagttccagaga
cttaaggtggaggatgcactgtcgtatcttgaccaagtaaagctgcagtttggtagtcag
ccccaagtctacaatgacttcttggatataatgaaggaattcaaatctcaaagtatcgac
actccaggagtgatcagccgtgtgtctcagctcttcaaaggtcaccctgacttgatcatg
ggcttcaataccttcttgccacctggctataaaattgaggtgcagacaaatgacatggtg
aacgtgacaacaccaggacaagttcaccaaatccctactcatggtctccagccacagccg
cagccacagtcccagcatcagtcccagccctcagcacagtcgaccccaaccccagcacag
cctgcaccacagccaccacctgccaaaatcagtaagccatcacagttgcaggcacatact
ccagccagccagcagactcctccagtcccaccatatgcatcaccacgctctccacctgtg
cagcctcatacacctgtgacaatctctcttggaaccaccccatccctgcagaacaatcag
ccagtagagtttaatcatgccatcaactatgtcaacaagattaagaatcggttccagggg
caaccagacatctacaaggctttcctggagatcctccacacatatcagaaagagcagcgg
aatgccaaggaggcaggaggtaactacacaccagctttgacagagcaggaggtgtacgcg
caggtggcacgcctctttaagaaccaggaggatttgctctcggagtttgggcagtttctg
ccagatgctaacagctctgtgctgttaagtaagacaactgcagagaaagttgagtctgta
agaaatgaccatggtggcacagtcaagaaaccccagctcaacaataagccgcaaagaccc
aaccaaaatggctgtcaaatccgacggcactcgggaactggagcaacccctccagtgaag
aagaaaccaaagctgcttggcctaaaggatcagtcattggcagaagccagcaagcatggt
ggggggacagagtcactgttctttgagaaggtccgaaaggctctgcgtagtacagaggca
tatgaaaatttccttcgctgtctggttatttttaaccaggaggtcatctcccgtgctgag
cttgtgcagctagtttctccattcttggggaaatttccagaactgttcacttggtttaaa
aactttttgggttacaaagagtctgttcatatggagacatttcccaaggagcgcgctaca
gagggaattgccatggaaatagactatgcctcctgtaaacgactgggttccagctaccga
gccttgcctaagagttaccagcagcccaaatgtacagggcggactccactgtgtaaagag
gttttgaatgatacttgggtctccttcccttcatggtctgaagattccacctttgttagc
tccaagaaaacacaatatgaagaacacatctacagatgtgaagatgagcgttttgagctg
gatgttgtcttggagaccaacttggcaacaatcagagtcctagaggcgatccagaagaaa
ctctctcgcttgtctgctgaggagcaagctaaattccgattggacaacactctaggtggc
acatcagaggtgatccaccgcaaggccttgcagaggatatatgctgacaaggcggctgac
atcatagatgggctgagaaagaatccatctgttgcagttcccattgtgctgaaaaggtta
aagatgaaagaagaagagtggcgagaagcccagagaggattcaacaaagtctggcgggag
cagaatgagaaatattacctgaaatcattggatcaccagggcatcaacttcaaacagaat
gacaccaaggtcctgaggtcaaagagtctcctcaatgagattgagagtatttatgatgag
aggcaagaacaagcttcagaagacaatgctggagtacccacaggcccgcacctgtcgctg
gcctatgaagacaagcaaatcttggaggatgctgcctccctcatcatccaccatgtaaaa
cggcagacaggaatccagaaagaggacaagtacaaaatcaagcagatcatgtatcatttc
attccagacctgctgtttgctcagcgaggtgagctctcagatgtggaggaggaggaggag
gaggaaatggatgtggatgaagccacaggggctgcaaaaaagcacaatggtgttggcggc
agtcctccaaaaaccaaactgatgttcaacaacacgacggctcagaagctgcgcggcatg
gatgaggtgtacaacctcttctacgtcaacaacaactggtacatattcatgcgactgcat
cagatcctgtgcttacgactgctgaggatttgcacccaagctgagcggcaaattgaagaa
gagaaccgggaaagggagtgggagcgggaagtgctaggcataaaacgagacaaaagtgac
agccctgccatccagctgcgactaaaggagcccatggatattgatgtcgaggattactac
ccagctttcctggacatggtgcggaatctgctagatggcaacatggactcatctcagtat
gaggactcgctgcgcgagatgttcactattcatgcctacatcgcctttaccatggacaag
ctgatccaaagcattgttagacagctccagcacatagttagtgatgagatctgtgtgcag
gtgacagatctttacctgtcagagaataacaatggagctactggaggtctgctgaccaca
caatcatctcgcacccttttggaggctacgtaccaacgcaaagcagagcagcttatgtct
gatgagaactgtttcaaactcatgttcattcagagtagaggtcaagtccagttaaccatt
gagcttctggacacagaagaagagaactcggatgaccctgtggaggcggaggtaagagag
gcagagcgctggtcagattatgtagagcggtacgtcaactctgattctacctcccctgag
cttcgggaacacctggcacagaagccagtcttcctgccgaggaatctgaggcggatccgt
aagtgtcagcgtggtcgggagcagcaggagaaggaagggaaggagggaaacagtaagaag
tccatggagaatgtggaaagcttggacaagctggagtgtaaattcaaactgaactcctat
aagatggtgtacgtgatcaaatcggaggattacatgtacaggaggaccgctctgctgcgt
gctcagcagtcccatgaaagagtgagcaagcggctgcaccagagattccaggcctgggtg
gacaaatggaccaaggagcatgtgacccgtgaaatggcagctgaaacaaacaagtggcta
atgggagaagggttggaaggcttggtgccatgtaccaccacctgtgatacagagaccctg
cactttgtgagcattaacaagtaccgtgtcaaatatggcacaatattcaagacaccataa
DBGET
integrated database retrieval system
