KEGG   Alligator mississippiensis (American alligator): 106736739
Entry
106736739         CDS       T03087                                 
Symbol
KDM5A
Name
(RefSeq) lysine demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:amj01009]
    106736739 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amj03036]
    106736739 (KDM5A)
Enzymes [BR:amj01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     106736739 (KDM5A)
Protein phosphatases and associated proteins [BR:amj01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106736739 (KDM5A)
Chromosome and associated proteins [BR:amj03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106736739 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 PHD_2 PHD_ash2p_like
Other DBs
NCBI-GeneID: 106736739
NCBI-ProteinID: XP_006265752
LinkDB
Position
Un
AA seq 1691 aa
MSGGGGGNGSRYAAEFVPPPECPVFEPSWEEFGDPLGFIGRIRGLAEKTGICKIRPPKDW
QPPFACEVQSFRFTPRIQRLNELEAMTRVKLDFLDQLAKFWELQGSNLKIPVVERKILDL
YGLSKIVASKGGFDVVTKEKKWSKVASRLGYLPGKGTGSLLKSHYERILYPYELFQSGVS
LMGIQKPNLDLKEKVEAEDLSSDAQASPKQGTRMNVTLKRTRRVKSQTETGEMSRNTELK
KLQIFGAGPKMMGLALGSKDKEDEVTRRRKGTRSEAFGMQMRQRKGTLSVNFVDLYVCLF
CGRGNNEDRLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAV
REYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDF
GSGFPVKDGRRKLMPEEEEYALSGWNLNNMPILEQSVLAHINADISGMKVPWLYVGMCFS
SFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMKELAPELFESQPDLLHQLVT
IMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQC
VNHYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKEMTLLIEEETRLRESVVQMGV
LMSEEEVFELVPDDERQCTACRTTCFLSALTCSCNPERLVCLYHPTDLCPCSMQKKCLRY
RYPLEDLPSLLYGVKVRAQSYDTWVSRVTEALSSNLNHKKDVIELRVMLEDAEDRKYPEN
DLFRRLRDAVKEAETCASVAQLLLSKKQKHRLSQDSGRTRTKLTMEELKAFVQQLFSLPC
VISQARQVKNLLDDVEEFHERAQEAMMDEVPDSSKLQMLIDMGSGLYVELPELPRLKQEL
QQARWLDEVRSTLSDPLRVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEK
AKVCLQARPRQSMMALEGIVNEAKNIPAYLPNVLTLKEALHRARDWTAKVEAIQNGSNYA
YLEQLESLSAKGRPIPVRLEALPQLESQVAAARAWRERTGRTFLKKNSSYTLLQVLSPRT
DIGVYGSSKNRRKRVKELMEKEKEKDLDLESLSELEDGLEEARDTATVVAIFREREQKEI
EAMHALRAANLAKMTMVDRIEEVKFCICRKTASGFMLQCELCKDWFHSGCVPLPKTSSQK
KGSSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMGWQD
RARQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLTSFQQ
SAFNRVIGSVSSSPRQTLDYDDEETDSDEDIRETYGYDIKDNVSVKSSSSLEPNLFCDEE
IPIKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKTPLVPRSLEPPVLELS
PGAKSQLEDLMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHVMEDDSLDEKPLKMRG
RDSSERKRKRKLEKAEQFFGEVKQKSKELKKLEKPKKKKLKLTMDKTKELNKLAKKLAKE
EERKKKREKAAAAKVELVKESTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRP
CKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKPMQGPSRPVHVSPPPFL
LRLEEDLKGTS
NT seq 5076 nt   +upstreamnt  +downstreamnt
atgtcggggggcggcggcggcaacgggtcgcgctacgcggcggagttcgtgccgccgccc
gagtgccccgtcttcgagcccagctgggaggagttcggcgatcccctcggcttcatcggc
cgcatccgcggcctggcggagaagaccggcatctgcaagatccgaccccccaaggactgg
cagcctccatttgcatgtgaagtacagagttttcgtttcaccccacgaatccagcgcttg
aatgaactggaggcaatgaccagagtgaagctggacttcttggatcaattagcaaaattt
tgggaacttcagggatccaatttaaaaattcctgtggtggagagaaaaatcttggatctg
tacggtttgagcaaaattgttgccagcaaaggaggctttgatgtggtcactaaagaaaag
aagtggtccaaagtggctagtcggctggggtacctgccaggaaaaggcactggatcacta
ctaaagtctcactatgaaaggatcttgtacccttacgagctcttccaatctggggtcagc
cttatgggtatccaaaagccaaacttggaccttaaggaaaaagtggaagctgaggacctc
agctctgatgcccaggcttccccaaagcagggtacaagaatgaatgttacgctgaagaga
accagacgcgtcaagtcccagacagagacaggagagatgagtagaaatactgaactgaag
aagctgcagatctttggagctggacctaagatgatgggattggcattgggatcaaaagat
aaggaagatgaggtgactcgaagacgcaaaggcaccaggtcagaagcctttggcatgcag
atgaggcagcgcaaagggacgctctctgtcaactttgttgatctatacgtttgcttgttt
tgtggccgaggaaacaacgaggacagactgttactctgtgatggttgtgatgacagctac
cacacattttgcctgattccccctttgcctgatgtgcccaaaggtgattggaggtgtcca
aagtgtgttgctgaggagtgtaataagccacgtgaggcctttggatttgagcaagctgtg
agggagtacactctccagagttttggtgaaatggcagataatttcaagtctgattacttc
aacatgccagtccatatggttcctactgagctggtagagaaggagttctggcgactggtg
agcagcattgaggaggatgtcattgtggaatatggagctgatatctcatccaaggacttt
gggagtggttttcctgtaaaggatggcaggcgaaagctgatgccagaggaggaggagtat
gcactttctggttggaacctgaataacatgcccattctggaacagtcagtccttgctcac
atcaatgcagatatctctggcatgaaggtgccttggctttatgtagggatgtgtttctca
tcattttgctggcacatcgaggatcactggagctattccatcaattacctgcactgggga
gagccaaagacgtggtatggggtgccctctcacgcagcagaacagctagaggaggtgatg
aaagagttggcccctgagctctttgaatctcagcctgatctcctgcatcagctggtcacc
atcatgaaccccaatgtgctaatggagcatggtgtgcctgtgtacagaactaatcagtgt
gctggcgagtttgttgtgacatttcctcgtgcctatcactccggatttaaccaaggttac
aactttgctgaggctgtgaacttctgcactgctgactggcttcccattgggcgtcagtgt
gtgaaccattatcggcggctaaggcgtcactgtgttttctcccatgaggagctgatcttc
aagatggcagcggatccagagtgtttggatgtgggacttgctgctatggtttgcaaagaa
atgactttgttgatagaggaggagacacgcctgagggaatctgttgtacagatgggagtg
ttgatgtcggaagaggaggtgtttgaactggttccagatgacgagcgtcagtgtacagcc
tgcagaactacatgcttcctttctgctcttacttgctcttgtaatcctgagaggcttgtg
tgcctgtaccatcccacagacttgtgtccctgttctatgcagaagaagtgtctaaggtac
cgttacccattagaggaccttccttctctgctgtacggagtgaaagttagagcacagtcc
tatgacacttgggtcagtagagttacagaggctctgtcttccaacctcaaccacaagaaa
gatgtgattgagctgagagtgatgttggaagatgctgaagacaggaagtatccagagaac
gatctcttccgtaggctcagagatgctgtgaaagaggcagagacctgtgcttcggtggct
cagctacttctaagcaaaaaacaaaaacacaggctgagccaggatagtgggaggactcgg
accaagctgactatggaagaactgaaagcatttgttcaacagctattcagcctaccctgt
gttatcagccaagcccgacaagtaaagaacctgctggatgatgtggaggagtttcatgag
cgtgctcaagaggccatgatggatgaggtcccagactcttccaagctgcaaatgttgata
gacatgggttctggcctctatgtggaacttcctgaactgccgcggctgaagcaagaactg
cagcaggcacgttggctggatgaggtgaggtccaccctttcagaccccttgagggtcacc
ctggatgtgatgaagaagctgattgactcaggtgttgggctggcaccacatcatgctgta
gagaaggccatggctgagctgcaggagctgcttactgtctccgagaggtgggaggagaag
gccaaagtctgtctacaggcaagaccacgtcaaagcatgatggctctggagggcatcgtg
aacgaagcaaagaacatcccagcttacctgcctaatgtactgacactgaaagaagccctg
caccgggctagagactggacagccaaagtggaggccattcagaatggtagcaattacgct
tatctggagcaactggaaagcttgtctgcaaaaggccgcccaataccggtacgtcttgag
gcactgccacagctggagtctcaggtagcagcagcacgtgcctggagggagcgcacagga
aggacttttctgaagaagaactcaagctacactctgttacaggttttgagtccccggact
gatattggagtttatggaagcagtaagaatagacggaaaagggtaaaagagttaatggag
aaggaaaaagagaaggatcttgacttggaatctctgagtgaactggaggatgggcttgag
gaagctagggacactgcaactgtggtggctatattcagggagcgggagcagaaggagatc
gaagccatgcatgccctcagggcagctaacctagctaagatgaccatggtggatcgtatt
gaggaagtgaagttctgcatctgtcgaaaaacagctagtgggttcatgctacaatgtgag
ctctgcaaggattggtttcacagtggctgtgtgccactccccaaaaccagttcccaaaag
aagggctccagttggcaggccaaagaagtcaagttcctgtgcccactctgcatgcgttct
cgaagaccccggcttgagaccatcctgtctctgctggtgtccctgcagaagcttcctgta
cggttgccagagggggaggcactgcagtgcctgacagaacgtgccatgggctggcaggac
cgagcacgtcaggctctggctactgatgaactgtcttctgctttggccaagctttctgtg
ctcagccagcgtatggtggagcaggcagcacgggagaagacagagaaaataatcagtgca
gagctacagaaagcagcagctaatcctgacctacagggccacttgactagtttccaacaa
tctgcttttaaccgagtgatagggagtgtttcctcatctccacgacagaccctggattat
gacgatgaagagacagattctgatgaagacatcagggagacttatggctatgacataaag
gacaatgtcagtgtgaaatcttccagcagcctggaacctaacctcttctgtgatgaggag
atccccatcaagtcagaggaagtggtgacacacatgtggacggctccctctttctgcgct
gaacatgcatattcatctgcttctaaaagttgttcacaaggttctagcaccccaagaaag
cagccccggaagacccctctggtacctcgcagtttggaaccccctgtactggagttgtca
cctggagctaagtcccaattagaggatctgatgatggtaggagatctcctagaggtatcg
ctggatgagacccagcacatctggcggattttacaggccacgcatccaccttcagaggac
agattccttcacgtcatggaggatgacagcctggatgagaagccattaaaaatgagaggg
agagattcttctgagaggaaacgaaaacgaaagctggaaaaggcagagcagttctttgga
gaagtgaagcagaaatctaaagagttgaagaaactggagaagcccaaaaagaagaaacta
aaattaaccatggacaagacaaaggagttgaacaagttggcaaagaaactagccaaggaa
gaggagcggaagaagaaacgagagaaggcagctgcagcaaaggtagagctagtaaaggag
agcacagagaaaaagagagagaagaaggtactagatattccttctaaatatgactggtca
ggagctgaagagtctgatgacgagaatgctgtgtgcgctgcccagaactgccaaagaccc
tgcaaggacaaggtagactgggtacagtgcgacggtggctgtgacgagtggttccatcaa
gtgtgtgttggcgtctctccggaaatggctgagaatgaagattacatctgtataaactgt
gcaaagaaaccaatgcaggggccaagtcgcccagtacatgtatcaccaccccctttctta
ctgagactcgaggaggacctcaaggggacaagttag

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