Alligator mississippiensis (American alligator): 106736747
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Entry
106736747 CDS
T03087
Symbol
ACTN1
Name
(RefSeq) actinin alpha 1
KO
K05699
actinin alpha 1/4
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04510
Focal adhesion
amj04517
IgSF CAM signaling
amj04518
Integrin signaling
amj04519
Cadherin signaling
amj04520
Adherens junction
amj04530
Tight junction
amj04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106736747 (ACTN1)
04518 Integrin signaling
106736747 (ACTN1)
04519 Cadherin signaling
106736747 (ACTN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106736747 (ACTN1)
04520 Adherens junction
106736747 (ACTN1)
04530 Tight junction
106736747 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
106736747 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
106736747 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amj04812
]
106736747 (ACTN1)
04147 Exosome [BR:
amj04147
]
106736747 (ACTN1)
Membrane trafficking [BR:
amj04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106736747 (ACTN1)
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106736747 (ACTN1)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106736747 (ACTN1)
Exosomal proteins of colorectal cancer cells
106736747 (ACTN1)
Exosomal proteins of bladder cancer cells
106736747 (ACTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
FAZ1_C
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
106736747
NCBI-ProteinID:
XP_006266501
UniProt:
A0A151MB06
LinkDB
All DBs
Position
Un
AA seq
892 aa
AA seq
DB search
MDHYDSQQTNDYMQPEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM
VSDINNAWAGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDAQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK
NYITVDELRRELPPDQAEYCIARMAPYHGPDAVPGALDYMSFSTALYGESDL
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggatcattatgactcgcagcaaaccaatgactatatgcagccagaggacgactgggac
agggatctgcttttggatccagcctgggaaaagcagcagaggaagactttcacagcgtgg
tgtaattctcaccttcgcaaggctggcacacagattgaaaacatagaggaagatttcagg
gatggccttaaactcatgttacttctggaagtcatttcaggtgaacgtttggctaagcct
gaaagaggcaaaatgcgagtccataaaatttccaacgtaaacaaggccctggatttcatt
gctagcaaaggagtcaagttggtgtccattggagcagaagaaattgtcgatggcaatgtt
aaaatgacccttggaatgatctggaccatcatccttcgctttgccattcaggatatctca
gtagaagagacatctgctaaagaaggacttttattatggtgtcagaggaagacagctccc
tacaaaaatgtgaacatccagaatttccatatcagctggaaggatggtcttggcttttgt
gctttgattcacagacatcgcccagagctcatcgactatgggaagctacgaaaggatgat
cctcttactaacctaaacaccgccttcgatgtggctgagaagtacctggatatccccaag
atgctggatgcagaagacattgttggaacggcccgccctgacgagaaggccatcatgacc
tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagcaaat
cgtatctgcaaagtgctggcagtcaatcaagagaatgaacagctcatggaagactatgaa
aaactggccagcgatctgctggaatggatccgtcgcactatcccttggctggagaacagg
gcaccagaaaataccatgcaagccatgcaacagaaactggaggatttccgggactaccgc
cgcctgcacaaaccccccaaggtccaagagaagtgccagctcgagatcaatttcaacacc
ttgcagaccaagctgcggcttagcaataggccagcattcatgccatcagaggggaaaatg
gtctcggatataaacaacgcatgggcaggcctagagcaggctgagaaaggctatgaggag
tggcttttgaatgagatccgaaggctagagaggctggaccacctggctgagaagttccgg
cagaaagcttctattcacgagtcctggacggatggcaaagaggcaatgctgcagcagaag
gactatgaaacagctactctgtcagagatcaaggccctgcttaagaaacacgaggccttt
gagagcgacctggctgctcaccaggaccgcgtggagcagattgctgccattgcacaagaa
ctcaatgagctggattattacgactccccaagtgtcaacgcccggtgccagaagatatgt
gaccagtgggataatctgggtgccttaacccagaaacgtagagaagccttagagaggaca
gaaaagctgctggaaacaattgatcagttgtacctggaatatgccaaacgagccgcccca
ttcaataactggatggagggggccatggaagatctgcaggacaccttcattgttcacacc
atagaggagatccagggattgaccacagcccatgaacaattcaaagccactttgccagat
gccgacaaggagcgacaagccatcctgggaatccataatgaagtctcaaagattgtccag
acctaccacgtcaacatggcaggaaccaacccctacactaccatcaccccacaagagatc
aatggcaaatgggaccatgtgcggcagttagttccccggagggatcaggccctgatggag
gaacatgcacgccagcaacaaaatgaacggctccgcaaacagtttggtgctcaggctaac
gtcattggaccctggatccaaaccaagatggaggagattggccgcatttctatagaaatg
cacgggactctggaggaccagctcaaccacctgcggcaatatgagaagagcattgtgaat
tacaaaccaaagattgaccagctggagggagaccaccaacagattcaggaggctcttatc
tttgacaacaagcacaccaattacaccatggagcatatccgagtgggctgggagcagcta
cttacgacgattgccagaaccatcaatgaagtggaaaatcagattctgacccgcgatgcc
aaaggaatcagccaggagcaaatgaatgaattccgggcctctttcaaccattttgacagg
gaccactccggcacacttggccctgaggagttcaaagcctgcctgatcagcttgggttac
gatattggaaacgatgcgcagggagaggcagagtttgcccgtatcatgagcatcgtagat
cctaaccgcttgggagtagtgacattccaggccttcattgacttcatgtcccgggaaaca
gcggatacggatactgcggaccaggtcatggcttccttcaagatcctggctggagacaag
aactacatcactgtggatgaattacgacgggaactgcctcctgatcaggctgaatactgc
attgctagaatggcaccctaccatgggcctgatgctgtacccggtgccctggactacatg
tccttctccacagcactgtatggcgaaagtgacctttaa
DBGET
integrated database retrieval system
