Alligator mississippiensis (American alligator): 106736830
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Entry
106736830 CDS
T03087
Symbol
CHD2
Name
(RefSeq) chromodomain helicase DNA binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
106736830 (CHD2)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106736830 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
106736830
NCBI-ProteinID:
XP_006265468
LinkDB
All DBs
Position
Un
AA seq
1838 aa
AA seq
DB search
MMRNKDKSQGEEGSVHSHASSHSASEEASGSDSASQSESEQGSEQGSEHGSDSNSSSESS
ESQSESESESTGSKSQQTPPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKDEASSESENESPKRRGQKQMKKTNKWKREVSGEEEDEDGGGQGTSAESEPEPKKV
KARRPAPRRAVAKTSVKKPHKPQRGKRRKKQDSSEDDDDDDDDETPKRQTRRRAAKNVSY
KEDDDFETDSDDLIEMTGEGADEQQDNSETIEKVLDVKIGKKGATGASTTVYATEANGDP
SADFDPEKDEREVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWL
AKVSPEDVEYYNCQQELAAELNKQYQIVERVIAMKTNKSATGHSEFPAHSRKTSSTDPEY
LCKWMGLPYAECSWEDEALISKKFQHCIDSFNNRNNSKNIPTRDCKVLKQRPRFVALKKQ
PSYIGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLY
GPFLIVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNTIREYEWIHAQTKRLKFNVLI
TTYEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFEFWEDFEDDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKV
EQILRVEMSALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEE
NERENGSEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAIKHYP
FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDN
NSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSA
TDELLSQFKVANFATMEEEETELDEKSQRDWDDIIPEEQRKKVEEEERQKELEEIYMLPR
IRSSTKKAQTNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFT
DAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQL
KENPGEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLYKSIPTDLEERKKYCLTCRV
KAAHFDVDWGVEEDSRLLVGIYEHGYGNWELIKTDPELKLADKILPVETDKKPQGKQLQT
RVDYLLKLLKKDLEKKENTKDGEESKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNP
SEEGEVKEDGLEKSPVKKKQKKKENKENKEKQTTTKKEKEGDKEKKKTKDKKEKAKSSDA
KSGSKGTRSQGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKG
LMVQEQLEHTRTCLLKIGDRISECLKAYNDQDHIKLWRRNLWIFVSKFTEFDARKLHRLY
KMAHKKRSQEEEEQKKKEDMSGAKKPFRPEPSGSSHDSVMSQSHMPHNLHSQKLHLPPSH
PQQQMHGHQRDNYSHPNKRHFSNTDRGDWQRDRKFNYGGNSNQVWGGDRHHQYEQHWYKD
HHYGDRRSRGDPHRSSGNYRPNNLSRKRPYEPYNSERDHRGHRDYYDRHHHDSKRRRSDE
FRPQNYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHIDKSGDYKQPLPLPHPQVSDPRSP
PSQKSPHDSKSPLDHRSPLDRSLEQKNNPDYNWNMRKT
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagtccacagccatgcatcg
agtcactcggcatctgaagaggcctctggctccgactctgcaagccagtctgaaagtgag
cagggcagtgagcagggcagtgagcatggcagtgattcgaacagcagttcggagtcctcc
gagagccagtccgagtccgaaagcgagtcaacgggctcaaaatcccagcagaccccgcct
gaagccaaggaaaagccagcctccaagaaggaaaggatagcagatgtgaaaaagatgtgg
gaagaatatcctgatgtttatggggttaggaggtcaaaccgaagcagacaagagccgtcg
cgatttaatataaaagatgaggcaagtagcgaatctgaaaatgagagccccaaaagaaga
ggccagaagcaaatgaaaaaaacaaataaatggaaaagggaggtttctggggaagaggaa
gatgaagatggaggggggcaaggcaccagtgcagaaagtgaaccggagccgaagaaagtt
aaagctaggagacctgccccaagaagagcagtggccaaaaccagtgttaaaaagccccac
aaaccccagcgtgggaagaggagaaagaaacaagactcatcagaagatgacgatgatgat
gatgatgatgagactccgaaaaggcaaactcgccgcagagcagccaaaaatgtcagttac
aaagaagatgatgattttgagactgattcggatgacctgattgagatgaccggggaagga
gcggacgaacagcaggacaacagcgagaccattgagaaagtcttggatgtcaagattgga
aagaaaggagccactggcgcttccaccaccgtgtatgctacggaagccaatggtgaccct
agtgctgattttgaccctgagaaggatgaaagagaagttcaatacttgatcaaatggaag
ggctggtcttacatccacagcacgtgggaaagtgaagagtccctgcagcagcagaaggtg
aagggtctgaaaaagctagaaaacttcaagaagaaagaggaggaaatcaaacagtggcta
gccaaggtgtcccccgaagatgtggaatactacaactgccaacaggaactggctgcagag
ctgaataaacagtatcaaatagtggagagagtgattgctatgaaaaccaacaagtctgca
acgggacattctgaattcccagctcacagtcggaaaacatcctctaccgatcctgagtat
ctgtgcaagtggatggggctgccatacgcagaatgcagctgggaagacgaggctctgatc
agcaagaaattccaacactgcatcgacagcttcaacaatcgcaacaactccaaaaacatt
cccacgcgggattgcaaggtgctgaagcagagacctaggtttgttgccttgaagaaacaa
ccttcttatattggtggcgagaacctggagctccgagattaccagctggaaggcctcaac
tggcttgctcactcgtggtgcaagaacaacagtgtgatcctggctgatgaaatgggcttg
gggaagactatccagacaatatcattcctctcctatctcttccatcagcatcagttgtac
ggcccctttctaatagtggtacctttgtctactctcacctcatggcagagagagtttgaa
gtctgggcaccggagataaatgtggtcgtgtacataggagatctgatgagcaggaatacg
atccgtgaatatgagtggatccatgctcagacaaaaaggttgaaattcaacgtgctcatc
acaacgtacgagatcctcctcaaagataaggctgtcctgggcagcattagctgggccttt
ttgggagtggacgaagcccatcgactgaagaatgatgactctctgctgtataaaactctg
attgatttcaagtccaatcacaggctgttgatcactgggaccccactgcagaattctctc
aaggagctctggtcactgctgcactttattatgccagagaagtttgagttctgggaggat
tttgaagatgatcatgggaaagggagagagaacggctaccagagtcttcacaaagtcctg
gagccttttctcctgcgcagggtgaagaaggatgtggaaaaatccctgccagccaaagtg
gagcagattctccgggtggaaatgtctgccctgcagaagcagtattataaatggattttg
accagaaattacaaggctctttctaaagggacaaggggcagcacatctggcttcctaaat
attgtgatggagctgaagaagtgctgcaaccattgctatctcatcaaacctccagaggaa
aatgagagggagaatggctctgagatactgctgtctctgatcaggagcagtggaaagcta
attctcttggacaagctgctgaccaggctgcgtgagaggggtaacagagtcctgatcttc
tctcagatggtgaggatgctggacatcttggcagagtacttggctatcaagcactaccct
tttcagcgcttggacgggtcgatcaaaggcgagatccggaagcaggctctggatcacttc
aacgctgatggctctgaggacttctgtttcctgctgtcaacacgagctggtggactgggg
attaacctggcttctgcagacaccgtggtgatctttgactcggattggaacccccagaat
gacctgcaggctcaggcccgggctcacagaatcggacagaagaagcaggtgaacatttac
cgcttggtaacaaagggaacagtagaagaggagatcatcgagagggccaagaaaaagatg
gtgttggatcatttggtgatccagcgtatggacaccacaggtcggactgtactggataac
aattctgggagatccaactcaaatcctttcaacaaagaggagctgacagctattctgaag
tttggagcagaagacctcttcaaggagctagaaggggaagagtcagaacctcaggaaatg
gatatcgatgagattctgcgcctggctgaaacacgagagaacgaagtgtccacgagcgcc
acggatgagctcctgtcccaattcaaggtggccaactttgcaaccatggaggaggaggag
actgagctggatgagaagtcccagagggactgggatgacatcattcctgaggagcagagg
aagaaagttgaggaggaggaacgacagaaagagctggaggaaatctacatgttacccaga
atccggagctctaccaaaaaggctcagacaaatgacagtgagtcagatgctgaaacaaag
aggaggcttcagaggtcttccgggtcggagagtgagaccgatgacactgatgatgaaaaa
aggccaaagcgcagaggccgtccccggagcgtgaggaaggatactgtggaaggattcacc
gacgctgaaatcaggaggtttatcaaggcttataagaagtttgggcttcctcttgaaagg
ctggagtgcattgcccgggatgctgagctggtggacaagtctgtagccgatctgaaacgt
ttgggggagcttattcacaacagctgcgtgtcagcgatgcaagaatatgaggagcagctg
aaagaaaatcccggtgaggggaaagggcctgggaaaaggaggggcccaaccatcaagatt
tctggagtccaagtcaacgtcaaatccatcatccagcacgaagaggagtttgaaatgctg
tacaaatccattcccacagaccttgaggaaaggaagaaatactgcctgacctgtcgtgtc
aaagctgcccattttgatgttgactggggagtggaggaggattctcgcttgttagttgga
atttatgagcacggctatggaaactgggagctaattaaaacggacccagaactgaagtta
gctgataagatcctacctgttgagacagataagaaacctcagggaaagcagctccagacc
cgagtcgactatctgctgaaactgctgaagaaagatctggagaagaaagaaaacacgaaa
gatggggaagagagcaaactaaagaagaggaaaccacgtgtaaagaaagagaataaagct
cctaaagtcaaagatgagcatgggaatgaactgtcctcacctcggcactcggacaaccca
tcagaagagggtgaagtcaaggaggatggtttggaaaagagcccagtgaaaaagaaacag
aagaagaaagagaacaaagagaacaaggagaaacagacaaccactaaaaaggagaaggaa
ggcgacaaagagaaaaaaaagacaaaggataagaaagagaaggccaaaagcagtgatgca
aaatctggaagtaaagggacgagatctcagggtcctgtgcacattactgcaggaagtgaa
cccatccccattggcgaagatgaggatgatgatctggaccaagaaacattcagcatatgc
aaagagaggatgaggccagtgaagaaggcattgaagcaactggataagccagataaggga
ttgatggtgcaggaacagctggagcacacccgcacctgcctcctgaaaattggggatcgc
atctcagagtgccttaaagcgtataatgaccaggatcacattaagctgtggagaaggaac
ctatggatctttgtgtccaagttcaccgaatttgatgccagaaaactgcacaggctctac
aagatggctcacaagaaaaggtcccaggaggaggaggagcagaagaagaaggaggatatg
tctggagccaaaaagccatttcgcccagaaccgtcaggctccagccatgactctgtgatg
tctcagtctcacatgcctcacaacctgcactctcagaaactccacctgcctccctcccac
cctcagcagcagatgcatggccaccagcgggataactacagccaccccaacaagagacac
ttcagtaacacagatcgaggcgactggcagagagatcgaaagtttaactatggtggtaac
agcaaccaggtctggggtggagatcggcatcaccagtacgaacagcattggtacaaggat
caccactatggggatcgccggtctcgcggcgaccctcaccgaagctctgggaactaccga
ccaaataacctctcccgcaaaaggccgtatgagccgtacaatagtgagcgagaccacaga
ggacacagagattattacgacagacaccatcacgactccaagcggcgacgatccgatgag
ttcaggccccagaattaccaccagcaggatttccggaggatgtcagatcacaggccaccc
atgggataccatggccagggaccttcggaccattaccggtccttccacatagacaaatcg
ggggattacaaacagccgcttcctcttcctcacccccaagtctcggaccctcgctcgccc
ccgtctcagaaatcccctcacgattccaagtcgcccctcgatcaccggtcgcccctggac
aggtcattagaacagaaaaacaatccagattataactggaacatgcggaaaacataa
DBGET
integrated database retrieval system
