Alligator mississippiensis (American alligator): 106736918
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Entry
106736918 CDS
T03087
Symbol
TIA1
Name
(RefSeq) TIA1 cytotoxic granule associated RNA binding protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
106736918 (TIA1)
03041 Spliceosome [BR:
amj03041
]
106736918 (TIA1)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106736918 (TIA1)
Spliceosome [BR:
amj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106736918 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Nup35_RRM_2
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
106736918
NCBI-ProteinID:
XP_006272065
UniProt:
A0A151P516
LinkDB
All DBs
Position
Un
AA seq
384 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
SALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVNTQRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMISPIQQNQIG
YPPAYGQWGQWYGNAQQISQYMPNGWQVPAYGMYGQTWNQQGFNQTQSSAAWMGASYGVQ
PPQGQNGSVLTNQTGYRMAGFETQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaaatgcccaagaccctatacgtggggaacttgtcaagagatgtgacagaa
gccctgatcctccagctgttcagtcagattggaccgtgcaaaaattgcaaaatgatcatg
gatacggctggaaatgatccatactgttttgtggagttttatgagcatcgacatgcagct
tcagcactagcagctatgaatggacggaagataatgggtaaggaagtcaaagtgaactgg
gcaacaacccccagcagccagaagaaagataccagcagtagtaccgttgtcaacacacag
cgttcacaagaccatttccatgtctttgttggagacctcagtccagaaattaccactgaa
gatataaaagcagcttttgcgccatttgggagaatatcagatgcacgggtggtgaaagat
atggcaacaggaaaatccaaaggatatggctttgtttccttcttcaataaatgggatgca
gaaaatgctattcagcagatgggcggacagtggctcggtggaagacaaatcagaaccaac
tgggcaacacgaaaacctccagctccaaagagtacatatgagtccaacaccaaacagctg
tcttacgatgatgttgtaaatcagtccagcccaagcaactgcactgtatattgtggtggt
gtcacatcaggactaacagaacagctgatgcgccagaccttttctccatttgggcagata
atggaaattcgagtcttcccagataaagggtactcatttgtaaggttcaattctcatgaa
agtgctgcacatgcaattgtttctgtcaatgggactactatagaagggcatgtcgtgaag
tgctattggggcaaggaaactccagatatgatcagtccaatccagcagaatcaaattgga
tatccacctgcttacgggcagtggggccagtggtatggaaatgcacaacagatcagtcag
tacatgcctaatggctggcaagttcctgcatatggaatgtatggacaaacctggaatcag
cagggatttaaccagacgcagtcttctgcagcatggatgggtgcaagttatggagttcaa
ccacctcaagggcagaatggaagcgtgctaactaatcaaactggatatcgtatggcaggt
tttgaaacgcagtga
DBGET
integrated database retrieval system
