Alligator mississippiensis (American alligator): 106736977
Help
Entry
106736977 CDS
T03087
Symbol
SRF
Name
(RefSeq) serum response factor
KO
K04378
serum response factor
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106736977 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
106736977 (SRF)
Transcription factors [BR:
amj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
106736977 (SRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
106736977
NCBI-ProteinID:
XP_019331590
LinkDB
All DBs
Position
Un
AA seq
581 aa
AA seq
DB search
MHLALPIDTHLTLVLLMLAIATSLWYVGHLFCGGKATTSEAVLEVSDALQDVPVDNILHV
HDPQLVECASGYLKGYWRSLTACLEVAENNLPWVVIIACLLHNICEAWEQLFCKAWAEEV
WRGNGAAPPGGPGLVGGRFERDRDAAGPGPGYSGSEGDSESGEEEDLGGGERRGLKRGLG
DVELGVVVGSEAAAAAATGYGSVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKR
KTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDS
PPRSDPTTDQRMSATGFEETDLTYQVSESDSSGETKDALKPAFTVTNLPGTTSTIQTAPT
TSTSMQVSSGPSFPITNYLAPVSASVSPNAVTSANGTVLKTTGTSAVTSGGLMQIPTSFT
LMSGGAMAQQVPVQAIQVHQAPQQTSPSSDSSTDLTQTSSSGTVTLPATIMTSSVPTTVG
GHMMYPSPHAVMYAPTSGLTDGGLAVLNAFSQAPSAMQVSHGQVQEQGGVPQVFLTAPSG
TVQIPVQLHQMAVIGQQTSSGSNLTELQVVNLDTSHSTKSD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcacctggccctccccattgatacccacctgaccctggtgctgctcatgctggccatt
gccaccagcctctggtatgtggggcatttgttctgtggaggcaaggccaccaccagtgag
gctgtcctggaggtgtctgatgccctccaggatgtgccggtagacaacatcctccatgtc
catgacccccagctggttgagtgcgcctctggctacctcaagggctactggcgctccctc
actgcctgcctcgaagtggctgagaacaaccttccctgggtcgtcatcatagcatgtctg
ctgcacaatatctgcgaggcatgggaacagttgttctgcaaggcctgggcagaggaggtg
tggcgcggtaacggcgccgccccgccgggcgggcccgggctggtcggtggccgcttcgag
cgggaccgggacgcggcggggccggggccgggctacagcggcagtgagggcgactcggag
tcgggggaagaggaggatctgggcggcggggagcggcgcggcctgaagcggggcctgggg
gacgtggagctgggggtggtggtgggctcggaggcggcggcggcggcggccacgggttac
ggcagcgtgagcggggccgtgagcggggccaagcccggcaagaagacgcgcggccgggtc
aagatcaagatggaattcatcgacaacaagctgcggcgctacaccacattcagcaagagg
aagacgggcatcatgaagaaggcttatgaactctcaaccctgacaggcacgcaagtgttg
ctcctggttgcaagtgagacaggtcacgtgtacacatttgccactcggaagctgcagccc
atgatcaccagtgagacggggaaagccctgatccagacatgcttgaactcgccagactcg
cccccacgctcagatcccaccactgatcagcgcatgagtgccacgggttttgaggagacg
gacctcacttaccaggtgtcagagtcagacagcagtggggagaccaaggatgcactgaaa
cctgcattcacagttaccaacttgcctgggacaacatcaaccatccagactgcacccacc
acctccacctccatgcaggtcagcagtggcccctcattcccaatcaccaactacctagca
ccagtctctgccagtgtcagccctaatgccgtcaccagtgccaatgggacagtcctgaaa
accactggaaccagtgcagtgacctccggagggctaatgcagatacccaccagcttcacc
ctcatgtcaggtggtgctatggctcaacaggttccagtccaagccatccaggtgcaccag
gccccacagcaaacgtctccttccagtgacagcagcactgatctcacccagacctcttcc
agtggaacagtgacactgccagcaacgatcatgacttcgtctgtgccaaccactgtggga
ggccacatgatgtaccccagcccacacgcagtgatgtatgcccccacgtctggtctcacc
gatggtgggctcgcagtcctcaatgctttctcccaggcaccatcagcaatgcaggtctct
catggccaagtccaggagcagggtggagtcccacaggtgttcctgacagccccatctggc
acagttcagatcccagtccaacttcatcagatggctgtcattggccagcagaccagcagt
ggcagcaacctgacggagctgcaggtggtgaatttggacacatcacacagcaccaagagt
gactga
DBGET
integrated database retrieval system
