Alligator mississippiensis (American alligator): 106736987
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Entry
106736987 CDS
T03087
Symbol
LRFN5
Name
(RefSeq) leucine rich repeat and fibronectin type III domain containing 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
106736987 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
106736987 (LRFN5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
Cys_Knot_tox
LRRCT
DUF240
Motif
Other DBs
NCBI-GeneID:
106736987
NCBI-ProteinID:
XP_006270167
UniProt:
A0A151PDX0
LinkDB
All DBs
Position
Un
AA seq
736 aa
AA seq
DB search
MEKLLLYLLFIGVAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVLALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDHIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPPLLSGRYFWSIPEEEFLCEPPLITRHTHELRVLE
GQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGSFTCIAS
NPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNASSNNGDTKSSQDK
KVVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKTFLVNNLAAG
TVYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNNNGQHKVTNVNNVYSQTNGAQIQGCSGAMPHSMSKQVVGHEES
VQCCKVPNDNVTQSSDTCSSQDSTTTTSALPHTWTSSTSAPQKQKRKPGPKPSNEPQSEA
VTNIESQNTNRNNSTALQLASRPRDAVKGAPMYKRAQSKPKAAVHQMTACPPPPPESVAT
DVLTRPKSIRFQLTED
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgcttttgtatctgctgttcattggcgtagcagtgagagcccagatctgc
ccaaagcgctgtgtctgtcaaatcttgtctccgaatctcgcaaccctttgtgccaagaaa
gggcttttatttgtcccaccaaacatcgacagaaggactgtggagctgcggctggcagac
aattttgttacaaatatcaaaaggaaagattttgccaatatgaccagccttgtggacctg
acgctgtccaggaatacaataagttttattacaccccatgcgtttgctgatttgcgcaat
ttgcgggctttgcatttgaacagcaaccgattgactaagatcaccaatgacatgtttagt
gggctttccaacctgcaccacttgatactgaacaacaaccagctgactttgatttcttcc
acagcgtttgatgatgttttggccctggaggaactggatttgtcctataacaacctggaa
accatcccttgggatgctgtggagaagatggttagcttgcacacgctcagtctggaccat
aatatgattgaccacattcctaaggggactttctcccatctccacaagatgaccaggtta
gatgtcacgtcgaacaaactgcagaagctgccgcctgatcctctctttcagagagctcag
gtattagcaacctcaggaattatcagcccctcgacttttgcgttgagctttggtgggaac
cctttgcattgcaactgcgagctcctgtggctgaggcgcctttccagagaagacgaccta
gagacgtgcgcctctcccccgctgctctccggtcggtacttttggtcgatcccagaggag
gagttcctgtgcgagcccccgctcatcaccaggcacacgcacgagctgagagtgctcgag
ggccaaagggccaccctgcgttgcaaggcccgcggagatccagagccagcgatccattgg
atttcaccggagggcaaactgatttcaaatgcaacaaggtcgctggtgtatgacaacggc
acgcttgacatattgataaccacggtcaaggatacaggttccttcacctgcatagcttcc
aacccggcaggagaagccacgcaaacggtggatctgcacatcatcaaactccctcatttg
ctaaacagtacaaaccacatccacgagcccgaccccggctcctcggatatctcgacttcc
accaagtcgggttccaacgcgagcagtaataacggggatactaaaagcagccaggacaag
aaagtggtggtggcggaagctacgtcgtccaccgccctgctgaaatttaattttcaaaga
aatatacctggaatacgtatgttccagatccagtacaatggcacttacgatgactcactt
gtttacagaatgatacctcccacgagcaaaaccttcctggtcaacaacctggccgcgggg
actgtctacgacctgtgtgtcttggcaatctacgacgacggcatcacctccctcactgcc
accagggtcgtggggtgcatacagttcaccacggagcaggattatgtgcggtgccacttc
atgcagtcccagttcctgggaggcaccatgatcatcattatcggtgggattatcgtggcc
tcggtgctggttttcatcatcatcctaatgatccggtacaaagtgtgtaataacaacggg
cagcacaaggtgaccaacgtcaacaacgtgtactcccagaccaacggggctcagattcaa
ggctgcagcggggcgatgccccattccatgtccaaacaggtcgtcgggcacgaggagagc
gtccagtgctgcaaagtcccgaacgacaacgtgactcagtcgtcggacacgtgctcgagc
caggactccactaccactacctctgctttgcctcacacgtggacttccagcacttctgcc
ccccaaaagcagaagagaaagccagggccaaagccaagcaacgagccacagagcgaagct
gtcacgaatatcgagtcccagaacactaacagaaataactccactgcactgcagttagct
agccgtccccgcgacgccgtcaaaggggcccccatgtacaaaagagcacaatcaaagcca
aaagctgcagtccatcagatgaccgcgtgccctccaccacctcctgaaagtgttgccact
gatgttttaactcgaccaaaatccatacggttccaactcaccgaagattaa
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