Alligator mississippiensis (American alligator): 106737012
Help
Entry
106737012 CDS
T03087
Symbol
COMP
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04145
Phagosome
amj04510
Focal adhesion
amj04512
ECM-receptor interaction
amj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106737012 (COMP)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106737012 (COMP)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106737012 (COMP)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106737012 (COMP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
106737012 (COMP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
106737012 (COMP)
00536 Glycosaminoglycan binding proteins [BR:
amj00536
]
106737012 (COMP)
Membrane trafficking [BR:
amj04131
]
Endocytosis
Phagocytosis
Opsonins
106737012 (COMP)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106737012 (COMP)
Exosomal proteins of colorectal cancer cells
106737012 (COMP)
Exosomal proteins of bladder cancer cells
106737012 (COMP)
Glycosaminoglycan binding proteins [BR:
amj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106737012 (COMP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
Motif
Other DBs
NCBI-GeneID:
106737012
NCBI-ProteinID:
XP_006271079
LinkDB
All DBs
Position
Un
AA seq
774 aa
AA seq
DB search
MPRRDSNMIATLAFAFLLSLCSFTSSQMTSVGGGDVGPQMLAEMRETNRVLLEVRDLLKQ
QIKEITFLKNTVMECDACGMHTEVTGPGISMTAFNRCVPNPCFPGVTCTQTSTEPGFRCG
GCPPGYTGNGTHCTDINECSVNPCFAKVHCTNTAPGYRCDPCPPGYSGQPVEGVGLPFAR
ANRQVCTDINECETPGATTCVPNSICINTRGSYKCGACKPGFIGDQVTGCRSQTQRRCPN
GELSPCHEKAECIVERDGSISCVCIVGWAGNGYICGKDTDIDGFPDEKLRCTDRKCRKDN
CLTVPNSGQEDADRDGIGDACDDDADGDGILNTEDNCVFVRNTDQRNADKDSFGDVCDNC
RNVKNNDQRDIDSDGKGDECDDDMDGDTIKNAVDNCKKIPNPDQKDSDGDGVGDVCDSCP
TVSNPDQKDTDHDLVGDVCDTNQDQDGDGHQDSRDNCPTVPNSSQQDTDGDGVGDECDDD
DDNDGIPDTKPPGPDNCRLVPNPGQEDTDGDGVGNLCEDDFDSDRVIDRIDVCPENAEVT
LTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFH
VNTATDDDYAGFIFGYQDSASFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPG
EYLRNSLWHTGDTTDQVKLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRARFYEGPEMVA
DTGVVLDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPGDYETFQTQQNQHRV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagagattccaacatgatcgcaactctagccttcgctttcctcctgagcctc
tgttcttttacatcaagtcagatgacaagtgttggaggaggcgatgttgggccccagatg
ctggctgagatgagagagacgaacagggtgctgctggaagtcagagacttgctgaagcag
cagatcaaggagataacattcctgaagaatacggtcatggagtgtgatgcctgtggcatg
cacacagaggtgactggcccagggatcagcatgacggcattcaacagatgcgtgccaaac
ccttgtttccccggcgttacctgtacccagaccagcaccgaacctggcttccgctgtgga
ggctgccctccaggatatacaggcaatgggacacattgcacagacatcaatgagtgctct
gtcaatccctgcttcgccaaagtccactgcaccaacacagcacctggctaccgttgtgac
ccctgccctcctggttactctggccagcctgtggaaggggttggactaccctttgccaga
gccaacagacaggtttgcactgacatcaacgagtgcgagacgcctggcgccaccacctgc
gtccccaactccatctgcatcaacacccggggatcctacaagtgtggggcttgtaagcct
ggcttcattggggaccaagtcactgggtgcagaagccagacacagagacgttgtcctaac
ggggaactcagcccatgccatgagaaggctgagtgcatcgtggagcgcgatgggagcatc
tcttgtgtgtgcatcgtagggtgggcagggaatggctacatctgcgggaaggacaccgac
atcgatgggttccctgatgagaagctgcgctgcacagaccgcaagtgccgcaaggacaac
tgcctgaccgtccccaactctggccaggaggatgcagacagggatggcattggcgatgca
tgcgatgatgatgcggatggagacgggatattaaatactgaggacaactgtgtctttgtg
cgcaatacggaccagcgcaatgcagacaaggacagctttggtgacgtctgtgacaactgc
cggaacgtgaagaacaacgaccagcgggacattgacagcgatgggaagggcgacgagtgt
gacgacgacatggatggagacacgatcaagaatgcagtggacaactgtaagaagatccct
aaccctgatcagaaggacagtgatggggacggcgtaggcgatgtgtgtgacagctgccca
accgtcagcaacccagaccagaaagatacagaccatgaccttgtgggagatgtctgtgac
accaaccaggaccaagatggggacggccaccaggactcgcgagacaactgccccacagtg
cccaacagctcccagcaggacactgatggtgatggggttggagacgagtgtgatgacgat
gacgataatgacggcatccctgataccaaacctccaggccctgataactgccggctggtc
cccaaccctggccaagaggatacagatggtgatggcgtggggaacctgtgtgaagatgac
tttgacagtgacagggtgatcgacagaatcgacgtgtgcccagagaacgcggaggtgacg
ctgacagacttcagggctttccagactgttgtgctggacccagagggtgatgcacagatt
gaccccaactggatcgtcctcaatcagggcatggaaatcgtccagaccatgaacagcgac
cccggcctggctgtgggttacactgcattcaacggcgtggattttgaaggcaccttccac
gtcaacactgctacggatgacgactatgctggctttatattcggctatcaggacagcgcc
agcttctacgttgtcatgtggaagcagatggagcagacctactggcaggcgaaccctttc
cgagcagtagctgagcctggcattcagctgaaggccgtgaagtctaaaacgggcccaggc
gagtatctccgcaattccctgtggcacacgggagacaccaccgaccaggttaaactgctg
tggaaagaccctcgcaacgttggctggaaggacaagacctcttaccgctggttcctccag
caccggccccaagttggctatatcagagctcgcttctacgaaggccccgaaatggtagcg
gacaccggtgtggtccttgatacaaccatgcgagggggtcgcttgggcgtcttctgcttc
tcgcaggagaacatcatctggtcaaacctgcgctaccgttgcaatgacaccattccagga
gattacgagacattccagacccagcagaaccagcacagggtttaa
DBGET
integrated database retrieval system
