Alligator mississippiensis (American alligator): 106737079
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Entry
106737079 CDS
T03087
Symbol
FUBP1
Name
(RefSeq) far upstream element binding protein 1
KO
K13210
far upstream element-binding protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
106737079 (FUBP1)
03041 Spliceosome [BR:
amj03041
]
106737079 (FUBP1)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
106737079 (FUBP1)
Spliceosome [BR:
amj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106737079 (FUBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
KH_KHD4_2nd
Secretin_N
KH_PARP10_1st
Motif
Other DBs
NCBI-GeneID:
106737079
NCBI-ProteinID:
XP_014449313
LinkDB
All DBs
Position
Un
AA seq
693 aa
AA seq
DB search
MADYSTVPPPASGAPGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSMNSNDYGYGG
QKRPLEDGDGSWTSLSSTAHWEGMPSPFKDQPDAKKVAPQNDSFGTQMPPMHQQQRSVMT
EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKR
LLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMI
QDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPI
PRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDL
LRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSI
SQQSGARIELQRNPPPNADPNMKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGP
HGVVPGPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPN
PPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPAGPAPTQTNGQGDQPNPAPAGQVD
YTKAWEEYYKKMGQQGQPQDYSKAWEEYYKKQGQAVPAPAGAPPGGQPDYSAAWAEYYRQ
QAAYYAQTSPQGMPQHPPAPQCRFDPASIELAL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggactattccacggtgccccctcccgcttcgggcgcgcccgggggaggcggtggc
ggaggcggaggggtcaacgatgcctttaaagacgcgctgcagcgggcgaggcagattgca
gcaaaaattggtggagacgcagggacctcaatgaactcgaacgactacggttatggagga
caaaaaagacctcttgaggatggagatggctcttggacaagtctgagcagtacagcacac
tgggagggaatgccctctccttttaaagatcaaccagatgctaagaaagttgcacctcag
aatgattcttttggaacccagatgccaccaatgcatcaacagcaaagatctgtaatgaca
gaggagtacaaggttccagatggaatggttggattcataatcggcagaggaggagaacag
atctcgcgcatacagcaagaatctggatgtaaaatacagatagctcctgatagtggtggc
ctgcctgaaagatcttgtatgttaactggaacacctgaatctgtccagtctgcaaagaga
ttacttgatcagatagttgaaaagggaagacctgcacctggctttcatcatggtgatgga
cctggaaatgcagtgcaagaaattatgattccagccagtaaggcagggttagttattgga
aaaggtggagagacaattaagcaacttcaggaacgagcaggagtcaaaatggtcatgatt
caagatgggccgcagaacactggcgcggacaagcctcttaggataacaggagacccatac
aaagttcaacaagccaaggaaatggtgttggagctaattcgcgaccaaggtggctttaga
gaggtgcgcaacgaatatgggtcaagaataggaggaaatgaagggatagacgttccaata
ccgcgatttgctgtaggtatagtaattggaagaaatggagagatgatcaaaaaaatacag
aatgatgctggtgttaggatccagttcaaaccagatgatggaacaactccagatagaata
gcccaaatcacagggcctccagacagatgccagcatgctgcagaaattataacagatctc
cttcgcagtgttcaggctggtaatcctggaggaccaggaccaggtggtcgtggaaggggt
agaggccaaggcaactggaacatggggcctcctggtggattacaggaattcaattttatt
gtacccactggaaaaactggattaatcattggcaaaggaggtgaaactatcaaaagcata
agccagcagtctggtgctagaatagaacttcagagaaatccaccaccaaatgcagatcca
aacatgaaaatgtttactatccgtgggacaccacagcagattgattatgctcggcaactt
atagaagaaaaaattggaggtccagtaaatcctttgggtccacctgttcctcatgggccc
catggtgttgttcctggcccacatggacctcctggaccgccaggtcctggcactcctatg
ggaccttataatcctgctccttataatccaggaccccctggtcctgcaccccatggtcca
ccagcaccatatgccccacaagggtggggtaatgcctatccacactggcagccaccaaac
ccaccagatccaggtaagccaggaacagaccccaattctgcagcatgggctgcttattat
gctcactactatcagcagcaagcacagccaccacctgcagctcctcctgctggaccagct
ccaactcaaactaatggacaaggagatcagccaaatccagcaccagcagggcaagttgat
tatacaaaggcatgggaagaatactacaaaaaaatgggtcaacaagggcagccacaagat
tattcaaaggcttgggaggaatattacaagaagcaaggtcaggcagttccagcaccagcc
ggggccccaccaggtggtcagcctgattacagtgcagcatgggctgaatattacagacaa
caggcagcatattatgcccagacaagtccacagggaatgccacagcatcctccagcacca
cagtgcaggtttgatccagccagtatagaactagctctgtag
DBGET
integrated database retrieval system
