Alligator mississippiensis (American alligator): 106737220
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Entry
106737220 CDS
T03087
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
106737220 (NPAS3)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106737220 (NPAS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
106737220
NCBI-ProteinID:
XP_019344311
UniProt:
A0A151NKG3
LinkDB
All DBs
Position
Un
AA seq
925 aa
AA seq
DB search
MAPTKPSFQQDPSRRERITVQHPLPNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAA
RSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEG
PPPNTSVKGIQLWKSEVCMRKTPCEVIGAQRRRSPSALAIEVFESHLGSHILQSLDGFVF
ALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQ
GTAEDGASSASSSSQSETPEPVESTSPNLLTTDNNLERSFFIRMKSTLTKRGVHIKSSGY
KVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNI
IYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNG
GYIWIQSSATIAINAKNASEKNIIWVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSD
SESDSKDNSEDNENSKSDEKGNQSENSEDPESDRKKSGNQSDNEMNCNDDGNSSSNQDSR
DSDDSFENSDFENQKAPEDSFGTLGSMQIKVERYVESESDLRLQNCESLTSDSAKDSDSA
GEVNAQSSSKHQKRKKRRKKQKGGSMTRRRLSSTSSPNGLDSALVDQPQLLSSPNSASVL
KIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPNSEHFPSPQASSSLHVSIPD
SVLTPPGTENTASRKTQFSTSSNSALAPVSSDPLSPPLSASPRDKHPGGPSTSNSLLYTG
DLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLPNT
HAVNFVDVNSPSFGLDPKTPMEMLYHHVHRLNMSGPFGSAVSGASLTQMPAGNVFTTAEG
LFSTLPFPVYSNGIHTTQTLERKED
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccaagccaagctttcagcaggatccttccaggcgagaacgaataactgtc
cagcatcctctacccaaccaatcagaatgtaggaaaatctacagatatgacggaatctac
tgtgaatctacctaccagaatttacaagccttgagaaaggaaaagtcccgagatgctgct
cgctctcgccggggaaaggagaattttgagttctacgagttggcaaaattgttgcctctg
cctgcagccattacaagccaacttgacaaggcatccatcatccgacttacaattagctat
ctaaaaatgagggactttgctaatcaaggggatcctccatggaacttgagaatggaagga
cctccacccaacacgtcagtaaaagggatacaattgtggaaatctgaggtctgcatgaga
aagacaccgtgtgaagttataggtgcccagcgcaggagaagtcctagtgcccttgcaatt
gaagtatttgaatcacatttgggaagccacattttgcagtctctggatggatttgtattt
gcactaaaccaagaaggaaaatttttgtacatttcagaaaccgtctccatctatctaggc
ctatcccaagtggaactgacaggcagcagtgtgtttgactatgtccacccaggagaccat
gtggagatggcagagcagctgggcatgaagcttcccccagggcgaggccttctctcacag
ggtacagcagaggatggagccagctcagcatcttcatcttctcagtcagagacccctgag
ccagtggaatcaacaagccccaatctactaaccactgacaacaacctagagcgctctttt
ttcatccgaatgaaatctacactgaccaagcgaggagtgcacatcaaatcatcaggatac
aaagtgattcatataacaggccgattacgtctcagagtgtcactgtcccatgggaggaca
gtccccagccaaatcatggggcttgtagttgttgctcatgctttgccacctcctacgatc
aatgaagtcagaatcgactgccacatgtttgttactcgcgtaaatatggacctcaatatc
atctactgtgaaaataggattagtgattacatggatctgacccctgtagatatcgtaggg
aagagatgttaccacttcattcatgctgaagatgtggaagggatcaggcatagtcactta
gacttgctgaataaaggtcagtgtgtaacaaaatattaccgctggatgcagaagaatgga
gggtatatctggatacagtccagtgcaaccatagcgatcaatgccaagaatgccagtgag
aagaatatcatctgggtcaattaccttctcagcaacccagagtacaaagacactccaatg
gatattgcacaacttcctcatctgccagagaaaacctcagaatcctcagagacctctgac
tctgaatcagactcaaaggacaactcagaggacaatgagaactcaaagtcagatgagaaa
ggaaaccaatcagaaaacagtgaagatcctgaatctgatagaaagaagtctgggaatcag
tcggataatgaaatgaactgtaacgatgatggcaacagctccagcaaccaggacagcagg
gacagcgatgacagctttgaaaattctgactttgagaatcaaaaggcccctgaggacagt
tttggcactcttggttctatgcagatcaaggtggaacgctacgtggaaagtgaatccgac
ttgcggttgcagaactgtgaatcattgacctcagacagtgccaaggactcagacagtgca
ggggaagtaaatgcccagtcttccagcaagcatcaaaagaggaagaagaggaggaaaaag
caaaaaggaggcagcatgacccgtagaaggctatcaagcacttcaagcccaaatggactt
gactcagctttggtggaccagccccagctgctctcgtcgccaaacagtgcctcagtgctc
aaaattaaaacagaaatctcagaacctatcaattttgataacgatagcagtatttggaat
tacccacccaacagggaaatctcaaggaatgaatcgccctacagtatgaccaagccccca
aactcagagcacttcccctccccacaagccagcagtagtttacatgtctccattccagac
tccgttctcaccccaccggggactgaaaatactgccagccgcaaaactcagttcagcacc
tcatccaactcagccttggctcctgtatcctctgaccctttgtcgcccccactttcagca
tctccacgggacaaacatccaggaggtcccagcacttccaactctttgttgtacactggg
gatctggaagcccttcagaggttgcaagcaggcaatgtggttcttcctttggttcacagg
gtaactggaacccttgctgccaccagcactgctgctcagagggtctacaccactggcact
attcggtatgctccagctgaagttactttagccatgcagggcaacctcctccccaacacc
catgctgttaactttgttgatgttaacagccctagctttgggctagatcctaaaacaccg
atggaaatgctctaccaccacgttcaccgactcaatatgtcaggaccattcggaagtgct
gtgagcggggctagtctgacccaaatgcctgcagggaatgtgttcacaactgccgaagga
cttttttccactcttccatttcctgtgtacagcaatggcattcacactacacagactctg
gaacggaaagaggattga
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