Alligator mississippiensis (American alligator): 106737272
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Entry
106737272 CDS
T03087
Symbol
TAF6
Name
(RefSeq) TATA-box binding protein associated factor 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106737272 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
106737272 (TAF6)
03036 Chromosome and associated proteins [BR:
amj03036
]
106737272 (TAF6)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106737272 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
106737272 (TAF6)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106737272 (TAF6)
STAGA complex
106737272 (TAF6)
TFTC complex
106737272 (TAF6)
SAGA complex
106737272 (TAF6)
SLIK complex
106737272 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-18kDa
Histone
Motif
Other DBs
NCBI-GeneID:
106737272
NCBI-ProteinID:
XP_019353139
LinkDB
All DBs
Position
Un
AA seq
700 aa
AA seq
DB search
MALCPPGAPPGRMAEEKKPKLSQTLLPGDSMKVVAESMGLAQVPEEAAQLLADEVSYRLK
EIAQDAVKFMHMGRRRKLTTSDIDYALKLKNVEPLYGFQAQEFLPFRFASGGGRELYFYD
EREVELSDIINTPLPRVPLDVCLKAHWLSIEGVQPAIPENPPPAPKEQQKTEATEPLKAA
KPGQDDDGALKGKGQSAAAPDAKGKEKKGGLLEGAALRLKPRSIHELSVEQQLYYKEITE
ACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKAL
MDNPTLYLEKYLHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQVCKNFSTTTN
NIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGPDVIKTLILPRLAGEGERVRAVLEG
PVLSTIDRIGADHVQSLLLKHCAPVLAKLRAPPDNQESYKADYGHLGALLCSHVVKARAQ
AALQAQQVNRTTLTITQPRPTLTLAQAPQSPAPRASPLLKVPGTLALPVPGLVPGGRPAP
PSQPSPPPTKFIVMSSASGSSASQQVITFTTAASPAGAGAAGGAPVAVGGAGGAPPPPPV
VKLVSAAPAPPSPGPSGPSLQKYIVVSLPPGPAPSPGPTPSAAGGLVGGAPGGTGAQASP
PAAAPPKAEASDSPQATPAPPASKANGAPGGTTPSPQPAQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtgccccccaggtgccccccccggcaggatggcggaggagaagaagccaaag
ctgagccagacgctgctgcctggtgactccatgaaggtggtggccgagtccatggggctg
gcgcaggtgcctgaggaggctgcacagctgctggctgacgaggtcagctaccgtctcaag
gagattgcacaggacgccgtgaagttcatgcacatggggcggcgccgcaagctgacaacc
agcgacatcgactatgcactcaagctcaagaacgtggagccgctgtatgggttccaggca
caagagttcctgcctttccgcttcgccagtggaggtgggcgcgagctctacttctatgac
gagcgcgaggttgagctcagtgacatcatcaacacaccgctgccccgcgtgcccctggac
gtgtgcctcaaggctcattggctcagcatcgagggcgtccagccggccatccctgagaac
ccaccccccgcccccaaggaacagcagaagaccgaggccacagagcccctgaaggccgca
aagccggggcaggacgacgatggggccctgaagggcaagggccagagcgcagccgccccc
gacgccaagggcaaagagaagaagggagggttgctggagggcgcggcactgcgcctgaag
ccgcgcagcatccacgagctctcagtggagcagcagctttactacaaggagatcacagag
gcctgcgtgggttcctgcgaggctaagcgtgctgaggccctgcagagcatcgccacagac
cccgggctctaccagatgctgccacgcttcagcaccttcatctccgagggggtgcgggtg
aatgtggtgcagaacaatctggcgctgctcatctacctcatgcgcatggtgaaggcgctg
atggacaaccccaccttgtacctggaaaaatacctgcatgagctgatcccagccgtgatg
acctgcatcgtgagccgccaactctgcctacgcccagatgtggacaaccactgggcgctg
cgcgacttcgccgcccgcctcgtagctcaggtctgcaagaacttcagcactaccaccaac
aacatccagtcccgcatcaccaagaccttcaccaagagctgggtggatgagaagacaccg
tggacgacgcgctatgggtccatcgcggggctggcggagctgggccctgatgtgatcaag
acactgattctgccgcgcctggcgggtgagggtgagcgtgtgcgcgcagtgctggagggg
ccagtgctcagcaccatcgaccgcatcggggctgaccacgtccagagcctgctcctgaag
cactgtgcgccagtgctggcaaagctgcgggcgccaccagacaaccaggaatcctacaag
gctgactacgggcaccttggtgccctgctctgctcccacgtggtcaaggcccgggcccag
gccgcgctgcaggcccagcaggtcaaccgtaccaccctcaccatcacccagccacggcca
acgctgacactggcgcaggccccgcagagcccagcaccacgcgcctcccccctcctgaag
gtgccggggacactggcactgcctgtgcctggtctggtgccaggggggcgcccggccccc
cccagccagccctcacccccccccaccaagttcatcgtcatgtcctcggcctctggctcc
agcgcctcccagcaggtgatcacgttcaccacggcagcatctccagcaggcgcaggggca
gctgggggagcccctgtagcagtggggggggcggggggggcaccacctccacccccagtg
gtgaagctggtgtcagctgccccagcccctcccagccctggcccctccggcccctccctg
caaaagtacattgtggtctccctgccccccggccccgcccccagccctggccccaccccc
tcagctgcgggggggttggtggggggagctccaggggggactggggcccaggcctccccc
cctgctgctgctccccctaaggctgaggccagcgacagcccccaggccacaccagccccc
cctgccagcaaggccaatggtgcccctgggggcaccaccccctccccccagcccgcccag
tga
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