Alligator mississippiensis (American alligator): 106737656
Help
Entry
106737656 CDS
T03087
Symbol
LCOR, WU:FC17B08
Name
(RefSeq) ligand dependent nuclear receptor corepressor
KO
K26260
ligand-dependent corepressor
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106737656 (LCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
106737656 (LCOR)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
106737656 (LCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4553
Motif
Other DBs
NCBI-GeneID:
106737656
NCBI-ProteinID:
XP_019346806
LinkDB
All DBs
Position
Un
AA seq
1606 aa
AA seq
DB search
MQRMIRQFAAEYTSKTSSTQDSSQPNSTKNQSLLKASLVASSPTAATAQNPVLSKLLMAD
QDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCAGSASLSHSPGCSTTPGNGEDAAEAITI
ESQSQPKSPLEKFMVRLCTHHQKQFIRVLNDIYTEVQPGPDGQPGPAPDSMDASTCSSGC
GQLRSPDAQEKGAACPELKPPSSSDPAQGPPSHPHGAGHAPKPPADLKPADRTESSAAAS
KRDCSEQPSSASPKESPAHGYLTTSNSSSLHFHPAAKGPEGPPVGHEPEPGAWRGEDKDP
LPGKALGWAASMNGSEDSLEGCLVTPRNSSFRAFPEEAWDPGFSARRADKENSLQCSSKA
SLHPDLEASEHDARPKPDHHLHGGGKAKAGYHLHPGDKPPLESARDAWLPAGKASHGHAR
AKAPPASIKTSRKSKRASGLRINDYDNQCDVVYISQPITECRFESQRAVAPRKTARKSTR
GYYFNGECCELPTVRTLAKSARAAEDRGGSAALRADALASAKQPAAAAGKDGDKRVSLRL
LAKGALPGRETKERAAESEPRETRTLKVRDVASAEPAPVPPAAPGSECAETPSSPLLTNG
TSPAPGCEEETWQPPIGGDGDAPSPASAGSCGDVGSEAASSSVAGDSALLPVSVAASSEA
GAPCSEAQATAEPPASGDLEPPPPPSPSPSPPAAAQPASPSSTDPEPPARGDVGPSTELP
PETPAAADQELPAEPPASPAAEPPTAPAAGVGCESPVQPAASPAPEPELSPSPPHGAGAE
SEGDAAALEAAISGTPGSSPQAREEAEPAPADLGESPEEEPAPSESQPGEDTIPMPPSPE
ASRADIREPVSPCENADKKRKKSRRALVASDRCLRSQHAAPGTEGSAEAPGSLTSLQLPC
LQIKLSKSPGAKRFKREVHLAGTAPVHFPNDCFHPALLEGTEMATELPAGKENGVTTRQT
YKSLLAKEAAAAEGQGPLGKGASPAPGSPSVSGDMLEICVEASSDKRSVLLPKDSGPGAE
VEAKQLAAEPREAAADAGQDPETSSDAGKGQPGDLASSSPAGPGSRGGSKHAPSKAAKLR
RQAPPSYNLRHTPVPSEAAKKSTPGKEAVQASPSPPKAEGNARAEESLEGDVPGDGKPRF
VEWCSEEENQELIAEFNTHYLKVQKGWIQLEREVQPAPKAKNRADKLKEIWKSKKRTRKS
RGPLEGQKLSPVQMLFMKAFQLSDICRWFLETTETRSLVIVKKLNTRLPGEMPPIKSPLQ
KFPMPGPYPSSLQAERLKKHLKKFPATTPARNNPKNQKLLAKLRESTDRMEAEPDASPAP
APPAAARCDAASEPRSTPPAPSLPTQASTRILRKYSQLRGKLRAQHRALKPEKKGDGAPE
PPVLESKSRKSVCINPLMSPKLALQVKADAFPKPAPAYRALKGRKGKGQPADDPPAKADP
QLGRKKKPPSEGSAAQERPGSSARDRLPAKKAGKAKHVEIPTKAPATRKQAAAERSNKLE
KKGPPKEKRALKRPLAKSRLSAHKGKENASRRAAPGHEGLARSPKQGPGGEPSTRSQKGS
CKKPSGGKTLTRAMKKSQEGAGSQGKRKLRAKGDCSHSKRTRLDTK
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaatgatccggcagtttgctgctgaatatacctcaaaaactagctctactcag
gactccagccagcccaatagcacaaagaaccaaagcctgctgaaagcatctctggtcgcc
tcctctcccacggctgcaactgctcagaaccccgtgctcagcaaacttctcatggctgac
caagactcgcctctggacctcactgtcaggaagtctcagtcagaacctagcgaacaagac
ggagtgcttgatctgtccaccaagaagagcccttgtgccggcagcgcctccctgagccat
tccccaggctgctccactactccagggaacggtgaggatgcggcagaggcaataaccatc
gagtcccagagccagcccaagtctccactggaaaagttcatggtccggctgtgcacgcac
caccagaagcagttcatccgcgtcctcaacgacatttacactgaagtgcagcccggccca
gacggccagccgggccccgcgcccgacagcatggacgcctccacctgcagctctggctgc
ggccagcttcgaagccctgacgctcaggagaagggcgccgcctgtcctgaattgaagccc
ccttcctcctccgaccccgcacagggccctccgagccacccgcacggggccgggcacgcc
cccaagccccccgcggacctgaagcctgcggacaggacggagagctcagctgctgcttcc
aaaagagactgttccgagcaacccagctcagccagcccaaaggaaagccctgctcacgga
tacctcaccacatccaactcttcctcactgcacttccaccccgctgccaagggcccggag
ggcccgcccgtgggccacgagcctgagccgggtgcctggagaggcgaggacaaggacccg
ctcccgggcaaggccctgggctgggcagccagcatgaatgggagtgaggacagcttggag
ggctgcctggtgacccccaggaactcctccttccgagccttccccgaggaggcgtgggac
ccggggttctcggcccggcgcgccgacaaggagaactcactgcagtgcagctccaaggcc
tcgctgcacccagacctggaggccagcgagcatgacgccagaccaaagccagaccatcac
ctgcacggcggcggcaaggcgaaggccggctaccacttacaccccggggacaaacctcct
ctggagagcgcccgtgacgcctggctgcccgccggcaaggcctcccacgggcacgcacgg
gccaaggccccccctgcctccatcaagacatcccggaagagcaagcgggcctcggggctg
cgcatcaatgactacgacaaccagtgcgacgtggtctacatcagccagcccatcaccgag
tgccgcttcgagagccagcgggccgtggcgccccgcaagacagcgcgcaagagcacgcgg
ggctactacttcaacggggagtgctgcgagctgcccaccgtgcgcacgcttgccaagagt
gcccgtgctgccgaggaccggggcggcagcgcggccctgagagcagatgccttggccagc
gcgaagcagccagccgccgcggcggggaaggatggggacaagcgggtctccctgaggctc
ctggccaagggggccctgccgggcagagagaccaaggagagagcagctgaaagcgagcca
cgcgagacccgcacgctgaaggtgagagacgtggcgagtgccgagccggcaccggtgccc
ccagcagcgccgggctccgagtgtgcagagacccccagctcaccgctgctcaccaacggc
acctctcccgccccgggctgcgaggaggagacgtggcagccaccgatcgggggggatggg
gacgctccctcacctgccagcgctggctcctgcggggacgtggggtccgaagcagccagc
agcagcgtggcaggggactctgctctcctccccgtctcggtagctgctagcagcgaggca
ggtgcaccgtgctctgaagcacaggctactgcagagccccctgccagcggggacctggag
cccccacccccaccctcaccctcaccctcaccgcctgccgctgcgcagccagcatcgcct
tccagcacggaccccgagcctcctgccaggggggatgtggggccctccacagagcttcct
ccagagacccccgctgctgcggaccaggagcttccagctgagcctccggccagcccagcg
gcagagccccccacggcccccgctgccggcgtgggctgcgagtcccccgtgcagcccgcg
gccagcccagcgccggagcccgagctctccccctccccaccgcatggtgccggtgccgag
agcgagggtgatgctgctgccctggaagccgccatctctgggacaccgggcagcagcccg
caggcacgggaggaggccgagccagcccccgcagacctcggggagagcccggaagaggag
ccagcgccaagcgagagccagccgggtgaggacaccatcccaatgccgcccagccccgag
gcctcgagggcagacatcagggagcctgtctccccctgcgagaacgccgacaagaagcgg
aagaaaagccggagggccctcgtggcctccgaccgctgcctccggagccagcacgccgcg
ccgggcaccgagggcagcgccgaggctccaggttccctcacgtccctgcagctgccctgc
ctgcagatcaagctttccaagagtcccggggcaaagcgcttcaagagggaggtgcacctg
gccggcacggcgcccgtgcacttccccaacgactgcttccatcccgcgctgctcgagggc
accgagatggccacggagctgccggctggcaaggagaacggcgtcaccactcggcagacc
tacaaaagcctgctggccaaggaggcggcggcagctgaaggacaagggcccctggggaag
ggagcctcccctgccccaggcagccccagcgtctcgggagacatgctggagatctgcgtg
gaggccagttcagataagcggagcgtcctcctcccgaaggacagcggcccgggggcggag
gtggaagccaagcagctggctgcagagccccgggaggcggctgccgatgctgggcaagac
cctgagacctcctcagacgctggcaaggggcagcctggggatctggccagcagttcaccc
gctggccccggcagcaggggcggaagcaagcacgctccatccaaggccgcaaagctgcgc
cggcaggccccaccttcgtacaaccttcggcacaccccggtccccagcgaggcggcgaag
aagagcaccccagggaaggaggccgtgcaagccagtccctcgccaccaaaggcagagggc
aatgccagggctgaagagtcgctggaaggggacgtgccgggagatggcaagccgcggttc
gtggagtggtgctccgaggaggagaaccaggagctcatcgccgagttcaacacccactac
ctgaaggtccagaagggctggatccagctggagagagaggtacagccggcccccaaagcc
aagaaccgggccgacaagctcaaggaaatctggaagagcaagaagcggacgcgcaagagc
cgggggccgctggaggggcagaagctctcgccggtgcagatgctgttcatgaaggcgttc
cagctctctgacatctgccgctggttcctggagacgaccgagacccgctccctcgtcatc
gtcaagaagctgaacacccggctgcccggggagatgccccccatcaagtcgcccctgcag
aagttccccatgcccgggccataccccagctccctgcaagccgagcgcctgaagaagcac
ctcaagaagtttccggccaccacgcctgccaggaacaaccccaagaaccagaagctgttg
gccaagctgcgggaaagcaccgacaggatggaggccgagccggacgccagtcccgccccg
gcaccgcccgccgcagcccgctgcgatgcggccagcgagccccgcagcacgccgcccgcc
cccagcctgcccacgcaggccagcacgcgcatcctgcgcaagtactcccagctgcggggc
aagctccgcgcccagcaccgggcgctgaagcccgagaagaagggggatggcgccccggag
ccccccgtcctggagagcaagagccggaagagcgtgtgcatcaacccgctgatgtccccc
aagctggccttgcaggtcaaagcggacgcgttccccaagccggcgccggcgtacagggcg
ctgaaggggcgcaaggggaaggggcagcccgcggatgaccccccggccaaggctgacccg
cagctgggcaggaagaagaagccgccgagcgagggcagcgctgcccaggagaggcctggc
tcctccgccagagaccggctccctgccaagaaggccggcaaagccaagcacgtggagatc
cccaccaaggcgcctgccaccaggaagcaggcggcagcggaaagaagcaataagctggag
aaaaaggggccgccgaaggagaagagagccctgaaaaggcctctggcgaaaagccgtctc
tccgcacacaagggcaaggagaacgccagcaggcgggcagcgcccgggcacgagggcctg
gccaggtcccccaagcaggggccaggcggggagccctccaccaggtcccagaaggggtcc
tgcaagaagcccagcggtgggaaaaccctgacccgggccatgaagaagagccaggagggc
gccgggtcccagggcaagagaaagctgagggcgaaaggggactgttcgcacagcaagcga
acgcggctggacacgaaatag
DBGET
integrated database retrieval system
