Alligator mississippiensis (American alligator): 106739073
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Entry
106739073 CDS
T03087
Name
(RefSeq) zinc finger protein 883
KO
K09230
SCAN domain-containing zinc finger protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
106739073
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106739073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_16
Zn_ribbon_8
DUF7837
zf-C2H2_11
zf_UBZ
Rv1322
Ribosomal_aS21
zf-C2H2_6
DUF7836
Zn_ribbon_SprT
zf-Di19
zf-met
DUF7066
zf-C2HC_2
DUF8106
C1_1
C1_4
MTNAP1_ZnF
DUF7479
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
106739073
NCBI-ProteinID:
XP_019354630
LinkDB
All DBs
Position
Un
AA seq
538 aa
AA seq
DB search
MEGEEKLSIVDFQGSVKRETPAGDRMASETEGENPQLEGPEHMQPHGMVSGRAEGDIFPE
KAEGCESQQGQEMQQGNQAGTKEEKNRTPIVSGKNSSPSSDLTGHQRGDAGERPYICPDC
GKSFTQKSALVRHQRLHTGEKPYSCRNCGKSFSVSSHLVTHQRLHTGERPYTCPDCGKSF
SESSNFIHHRRTHTGEKPYRCPECGKSFGNNSDLTRHHRIHTGERPYECPDCGKSFSVRS
HLVRHQRVHPKETSREGGDNSTLMAPEGPHLEERPHKCLDCGRSFGDSRGLLTHQRIHLE
VRPCVRSECGESFGVSSALLAHRRIHTDKKPHICRDCGKCFIRDSDLMIQQSVHAEEKPY
KCDECDKCFTHRSNLLAHLKHHTGNKPHQCEACGKSFVKRSVLIRHQRTHTEGKPFRCSL
CGKGFTQTSSLMRHEKVHEAERLSKPPEWLAEMNNTFIDSRGRAWNWVQEYPAAHLWAGE
TAIKNPKLIPDALSKPGLANSKQNSWSIGQPLLDSTLGPLPSAGTLKRGENKEKPSVD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggaaaagctgtccattgtggatttccagggctccgtgaaacgggagacc
ccagcaggtgacaggatggcgagtgagacagagggggagaatccccagctggagggtccc
gagcacatgcaaccacacgggatggtatctggaagagctgaaggggacattttccctgag
aaagcagaaggctgtgagagtcagcaaggccaagagatgcagcaaggaaaccaagcaggg
acaaaagaagaaaagaatcgcacacccattgtttctgggaagaacagtagtccgagctca
gacctcacaggtcaccagagaggtgatgcaggagagagaccttatatatgccccgactgt
gggaaaagcttcacccagaaatcagcccttgtgcgacatcaaagactccacacaggagag
aaaccctacagctgtcgcaattgtgggaagagctttagcgtgagctcccaccttgtcacc
catcagaggctgcacacaggggagagaccctacacctgccctgactgcgggaagagcttc
agtgagagctccaacttcattcaccaccggagaacccacacaggagagaagccctaccga
tgtcccgagtgcgggaagagcttcggtaacaactcggacctcacccggcatcaccgaatc
catacaggggagagaccttatgagtgccccgactgtgggaaaagcttcagtgtgagatca
cacctcgtgagacaccagcgagtgcatccaaaggagacctcaagggaaggtggggacaac
tcaacccttatggctcctgagggaccccacttggaggagagaccccacaaatgccttgac
tgtgggaggagctttggagacagcagaggcctcctcacccatcagcggatccacctggag
gtgagaccttgcgtgcgctcagagtgtggggagagctttggcgtgagctcagctcttctt
gcacaccggagaatccacactgacaagaaaccccacatatgccgcgactgcgggaaatgc
ttcattcgggactcagatctgatgatccagcagagtgtccacgcagaagagaagccctat
aaatgtgatgagtgtgataaatgcttcacccacagatcaaacctccttgcacatctcaaa
caccacacgggaaacaagccccatcagtgcgaggcctgcgggaaaagctttgtgaaacgg
tctgtcctcatcaggcatcagaggacccacacggaagggaaacccttcagatgttccttg
tgtggcaagggcttcactcagacctcgagtctgatgagacacgaaaaagtccatgaggca
gaaagactctccaagccccctgagtggttggcggagatgaacaacacattcatcgactcc
cgcgggcgtgcgtggaactgggtgcaggaatacccagccgcccatctctgggctggggag
acagcaatcaaaaaccccaaactgatcccagatgctctgtctaagccaggtctagcaaac
tccaagcagaacagctggagcatcggtcagcccctcctagattcaaccctaggtcctctc
ccttctgctgggacattgaagaggggagagaataaagaaaagccaagtgttgactga
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