Alligator mississippiensis (American alligator): 106739146
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Entry
106739146 CDS
T03087
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04517
IgSF CAM signaling
amj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106739146
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106739146
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amj04812
]
106739146
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
106739146
Intermediate filaments
Intermediate filament-binding proteins
106739146
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
DUF3829_2nd
PH_17
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
106739146
NCBI-ProteinID:
XP_019341802
LinkDB
All DBs
Position
Un
AA seq
1537 aa
AA seq
DB search
RREAAEAEARVAEAEELYAEVAELAGLRRQWLLDALAVYRMFGEVHACEVWIDEKEQWLQ
RLGLPRQLEDLEVVQHRFESLDQEMSSVMGRILDVNQIVQQLVDGGHPSSTEVMSCQDHL
NSRWNGVVELVEEKKAQLDAALRLQSYLLECAEVQVQLREKRQAVEATRQGGGSGGSELG
GVLALQRRLSAMEAALGVLEPRLARLQQEAEALATGSDAADVLLPFEELREEWEALTQAL
QGCEDALAVAGRLQRFIQDLDDFLSWLVRAQAAAGTSEVPGSLAEAERLLSRHAALKEEI
GRYEEDYARLQAVSDLLALEEADAACVSLQQWLQKLELGWSKLLQLWEARREVLVQAHIF
QLFLRDVQQAQACLCSQESTLAGAELPDTAQGVEAAIKQHRDFLTTMELHQQKTALALQA
GESLVRQGSLYRPRVEEHMGALRAKSQRNQELAQAWMQRLQDHLELQRFLQDCHELDAWM
REKMLMAREAGRDEAPRLRQRRLRHQACLAELAQNKEWLQKIEKEGQQLMQEKPELAGSV
QQTLGELRQCWAELESTTQAQSRELFEASRAERLARSFADLDRRLLHLEDQLQATGAGPD
LTSVNSQLKKLQTMETQVEEWCKEAGELQVQAAALAPEAVAQESVGERQSAVGTRIVRLI
EPLKERRRVLLASKELHQVTHDLEDEIIWVQDRLPLATLKEHGGNLQTVQQFIKKNQALR
RDLELHQARLEEVLERAGAAGAVPGPEAEAARQRRQRLAELWVQLQEAAARRQQLLDVTF
QVQQFCFDAAEVEAWLGEQELLLMDDEKGKDEQSTLQLLKKHLMLEQTIENYEETITQLS
RQCRALLELGHPDSEQISRRQSQVDRLYVSLKDLAEERKARLEQQYWLYQLSREVDELEH
WIAEKEVVAGSPELGQDYEHVTVLQEKFMEFASETGSAGHERISAVNQMVDELIDYGHAD
AATIAEWKDGVNEAWADLLELMETRAQMLAASHELHKFFSDCKDILAQIEEKKLRLPEVT
ARDGKSSAGALQRRLGSFEHDVQVLVTQVRQLQEGAAQLRTVYAGEHAEAIAAREQDVLR
TWKELLGACEAARLHVASAADRLRFASAARDLLAWMDGILGQIRASDKPRDVSSVEVLMN
YHQSLKSEMETRAPSLAACVELGKTLLLNKSPDANEIKAQLEKLLGKKKEMMEKWEKHWE
WLQQMLEVHQFAQEAVVADAWLTAQEPLLKSKELGNSVDEVEQLIRRHEAFRKAAVAWEE
RFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFLGDPTAEPGSRAVPLLRQALHDKAEARAE
LLRSRVETPAKVEPLEPRVAYVRHELKPERLQPKIDRVQESLAAAAAAQVPDSAPAPSSA
PPPPPPTHTAQLEGYLFRKRELEGPSKKASNRSWINLYCVLSKGDLGFYKDAKGQASGST
HGGEPLLSLAGALSEVASDYKKKKNVFKLKTSDGSEFLLQAKDEEEMQSWLTALSTAVQE
HAEIARWTQALLTTSSTDEGLPRREGDRRASTSGRRK
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
cgccgcgaggcggccgaggcggaggcccgtgtggccgaggcggaggagctgtacgccgag
gtggccgagctggccgggttgcggcggcagtggctgctggacgcgctggccgtctaccgc
atgttcggtgaggtccacgcctgcgaggtctggatcgacgagaaggagcagtggctccag
cgcctcgggctcccccgccagctggaggacctcgaggtcgtgcagcacaggttcgagagc
ctggaccaggagatgagcagcgtgatggggcggatcctggatgtgaaccaaatcgtgcag
cagctggtggacgggggccaccccagctccaccgaggtcatgtcctgccaggaccatctc
aacagcaggtggaacggggtggtggagctggtggaggagaagaaggcgcagctggacgcg
gcgctgcggctgcagagctacctgctggagtgcgccgaggtgcaggtgcagctgcgggag
aagcggcaagcagtggaggccacgcggcagggcggtggcagcggtggcagcgagctgggc
ggcgtgctggccctgcaacgccggctctcggccatggaggcggcgctgggcgtgctggag
ccccggctggcgcggctgcagcaggaggcggaagcgctggccacgggctccgacgccgcc
gacgtgctgctgcccttcgaggagctgcgggaggagtgggaggccctgacgcaggcgctg
cagggctgcgaggacgcgctggccgtggccggccgactccagcgcttcatccaggacctg
gacgacttcctgagctggctggtgcgggcgcaggcggccgcgggcacctcggaggtgccg
ggcagcctggccgaggcagagcggctgctgagccggcacgcggcgctcaaggaagagatc
gggcgctacgaggaggactacgcccggctgcaggcggtcagcgacctgctggcactggag
gaagccgacgcggcctgcgtgtccctgcagcagtggctgcagaagctggagctgggctgg
agcaagctgctgcagctgtgggaggcgcggcgcgaggtcctggtgcaagcccacatcttc
cagctcttcctgcgcgacgtacagcaggcccaggcctgtctctgcagccaggagtcgacg
ctggccggcgcggagctgcccgacacggcgcagggggtggaggcggccatcaagcagcac
cgggacttcctcaccaccatggagctgcaccagcagaagacggcgctggcgctgcaggcg
ggcgagagcctggtgcgccagggcagcctttatcgcccgcgtgtcgaggagcacatggga
gccctgcgggccaagagccagcgcaaccaggagctggcccaggcctggatgcagcgtctg
caagaccacctggagctgcagcggttcctgcaggactgccacgagctggatgcgtggatg
cgcgagaagatgctgatggcgcgcgaggccggccgcgacgaggccccccggctgcgccag
cgccggctccggcaccaggcctgcctggccgagctggcccagaacaaggagtggctgcag
aagatcgagaaggaggggcagcagctgatgcaggagaagccagagctggcaggctcggtg
cagcagacgctgggcgagctgcggcagtgctgggctgagctggagagcacgacgcaggcc
cagtcgcgggagctgttcgaggccagccgggccgagcgcctggcacgcagctttgctgac
ctggaccggcgactgctgcacctcgaggaccagctgcaggccacgggcgctggccccgac
ctcacctccgtcaactcccagctcaagaagctgcagacgatggagacgcaggtggaggag
tggtgcaaggaggccggggagctgcaggtgcaggcagcggcgctggcacccgaggcggtg
gcgcaggagtcggtgggcgagcggcagagcgccgtgggcacccgcatcgtgcgcctcatc
gagcccctcaaggagcggcgccgcgtgctgctggcctccaaggagctgcaccaggtcacc
cacgacctggaagacgagatcatctgggtccaggaccggctgcctctggccactctgaag
gagcacgggggcaacctgcagacggtgcagcagttcatcaagaagaaccaggccctgcgg
cgggacctggagctgcaccaggcgcggctggaggaggtgctggagcgggcgggcgcggcg
ggcgctgtgccaggccccgaggcggaggcggcacggcagcgccggcagcgcctggccgag
ctgtgggtgcagctgcaggaggcggcggcgcggcggcagcagctgctggacgtcaccttc
caggtgcagcagttttgcttcgacgcggccgaggtggaggcctggctgggcgagcaggag
ctgctgctcatggacgatgagaagggcaaggacgagcagagcacgctgcagctgctgaag
aagcacctgatgctggagcagacgatcgagaactacgaggagacgatcacccagctgtcc
cgccagtgccgggcgctcctggagctggggcaccccgacagcgaacagataagtaggcgc
cagtctcaggttgaccggctctacgtgtctctgaaggacctggccgaggagcgcaaggcg
cgcctggagcagcagtactggctctaccagctcagccgcgaggtggacgagctggagcac
tggatcgccgagaaggaggtggtggccgggtcgccggagctgggccaggactacgagcac
gtcacggtgctgcaggagaagttcatggagttcgccagcgagacgggcagcgccgggcac
gagcgcatctcggccgtgaaccagatggtggacgagctgatcgactacgggcacgcagac
gccgccaccatcgccgagtggaaggacggcgtcaacgaggcctgggccgacctcctggag
ctcatggagacacgggcccagatgctggcggcctcgcacgagctgcacaagttcttcagc
gactgcaaggacatcctggcccagatcgaggagaagaagctgcgcctgcccgaggtcacg
gcccgcgacgggaagtcttcggccggcgccctccagcgccgcctcggctccttcgagcac
gacgtccaggtgctggtgacccaggtgcggcagctgcaggagggggcggcgcagctgcgc
acggtgtacgcgggggagcacgccgaggccattgcggcgcgggagcaggacgtgctgcgc
acctggaaggagctgctgggcgcctgcgaggccgcgcggctgcacgtggcctcggccgcc
gaccgcctgcgcttcgccagcgccgcccgcgacctgctggcctggatggacggcatcctc
ggccagatccgcgccagcgacaagcccagggacgtgtcgtcggtggaagtgctgatgaac
tatcaccagagcctcaagagcgagatggagacgcgggcgcccagcctggccgcctgcgtg
gagctgggcaagacgctgctgctcaacaagagcccggacgccaacgagatcaaagcccag
ctggagaagctgctgggcaagaagaaggagatgatggagaagtgggagaagcactgggag
tggctgcagcagatgctggaggtgcaccagttcgcgcaggaggcggtggtggccgacgcg
tggctcacggcgcaggagccgctgctcaagagcaaggagctgggcaacagcgtggacgag
gtggagcagctcatccggcgccacgaggccttccgcaaggcggccgtcgcctgggaggag
cgcttcagctcgctgcggcgcctcaccacgatcgagaagctgaaggcggagcagagcaag
cagccgcccacgcccctgctgggccgcaagttcctgggggacccgacggcggagccgggc
tcgcgggccgtgccgctgctgcgccaggcgctgcacgacaaggcggaggcgcgggccgag
ctgctgcggagccgggtggagacgccggccaaggtggagccgctggagccgcgcgtggcc
tacgtgcgccacgagctgaagccggagcggctgcagcccaagatcgaccgggtgcaagag
agcctggctgccgcggccgccgcgcaggtgccggactcggccccggcgcccagcagcgcg
ccgcccccgccgccgcccacccacacggcgcagctggagggctacctcttccgcaagcgc
gagctggaggggcccagcaagaaggcctccaacaggtcctggatcaacctgtactgcgtg
ctgagcaagggcgacctgggcttctacaaggacgccaaggggcaggcgtcgggcagtacc
cacggcggcgagccgctgctcagcctggccggcgcgctcagcgaggtggccagcgactac
aagaagaagaagaacgtcttcaagctcaagacgagcgacgggagcgagttcctgctccag
gccaaggacgaggaggagatgcagagctggctgacggcgctgtccacggcggtgcaggag
cacgcggagatcgcgcgctggacgcaggcgctgctcaccacctcctccaccgacgagggg
ctcccccggcgggagggcgaccgccgcgccagcacctcgggccgccggaagtga
DBGET
integrated database retrieval system
