Alligator mississippiensis (American alligator): 109280377
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Entry
109280377 CDS
T03087
Name
(RefSeq) transcription factor HES-7.1-A-like
KO
K06054
hairy and enhancer of split 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03460
Fanconi anemia pathway
amj04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
109280377
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109280377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
109280377
03400 DNA repair and recombination proteins [BR:
amj03400
]
109280377
Transcription factors [BR:
amj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
109280377
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
109280377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Hairy_orange
INTS4_8HBD
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
109280377
NCBI-ProteinID:
XP_019331870
LinkDB
All DBs
Position
Un
AA seq
238 aa
AA seq
DB search
MDVAPSRGERGAAPTPRRAAQGARFPPSLYRKSIKPLVEKRRRARINASLEQLRRLLQQN
PEKQDARALSRLEKAEILEMTVQQLQRLKKPDIAASKDGQDFAAGYCHCLNAVSNFLSSD
GSSLNQNIKSQILRQLEDASKVRSTVAPNQSPKIWQPQEANLPSTKPHLRQSSAFFCVTA
PALLPPGTAMTLPALETQSRPREQMSQSPALGSQLPLLPSLSRTLTTPPATPQMWRPW
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggccccgagccgcggggagcggggcgctgcgcccacgccgcgccgggcagcg
cagggcgccaggttcccccccagcctctacaggaagtccatcaagcccctggttgagaag
cgccgccgtgctcggatcaatgccagcctggagcagttgagaagactccttcagcagaac
ccagagaagcaggatgctagagccctgtcacggctggagaaggcagagatcctggagatg
actgtacaacagttacagagattgaagaaaccagacattgctgcttccaaggatggccaa
gattttgctgctggttactgccattgcctcaatgctgtcagcaacttcctaagctcggat
ggctcttcattgaatcaaaacataaagtctcagatcttgcgccagctggaggatgcatct
aaggtcagatccactgttgccccgaaccagtctcctaaaatctggcagccccaggaggct
aatttgccttccactaagccacatctacgccaatcctcagccttcttttgcgtaactgct
cctgccttgctgcctcctggaaccgctatgaccctgccagctctagaaacccaatcccgc
cccagggaacagatgtctcaaagtcctgctttggggtcacagctaccccttcttccatca
ctctcccggactcttacaaccccccctgccacaccgcagatgtggagaccttggtga
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