Alligator mississippiensis (American alligator): 109281036
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Entry
109281036 CDS
T03087
Symbol
RORC
Name
(RefSeq) RAR related orphan receptor C
KO
K08534
RAR-related orphan receptor gamma
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
109281036 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amj03310
]
109281036 (RORC)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109281036 (RORC)
Nuclear receptors [BR:
amj03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
109281036 (RORC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
109281036
NCBI-ProteinID:
XP_019334546
LinkDB
All DBs
Position
Un
AA seq
525 aa
AA seq
DB search
MEPGGGARGRDGAGRGLAAMKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRS
QQGNVTYSCTRQQNCQIDRTSRNRCQHCRLQKCLSLGMSRDAVKFGRMSKKQRDSLHAEV
QKQLQQQQQQQGGEAAMASAYALGLANGQLKLASDPDLLEASACPGALLAGQARLGRVPE
EPPALAFSNGLAKAHGRLGGDPCGPFAREYSPERIKMDARGSIFYGPDAQASPDPTRLDI
GAKRGPGSSNPGESVDFYTSPSFTSILESPHSSVTEIEHLTQNVLKSYRETCQLRLEDLQ
LLRWETFSREEVSAYQKKSMEEMWERCACRITEAIQYVVEFAKRMGGFMELCQNDQIVLL
KAGAMEVVLVRMCRAFNSENRTVFFEGKYAGPELFKSLGCNELINSIFDFAHGLCSLHFT
ENEIALFTALVLINANRPWLQEKGKVERLQDNLELAFKHMLRKSHREGLLAKLPPKGKLR
SLCCQHMEKLRSFRQMHPIVVHAVFPPLYKELFSAEGEPQGLVAE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggcggcggcgcgcggggccgggacggagcgggcagaggtctggctgccatg
aagaagacccacacgtcccaaatcgaagtgattccatgcaagatctgtggggacaagtcc
tcggggattcattatggcgtcatcacgtgtgagggctgcaagggctttttccggaggagc
cagcaaggcaatgtcacctactcctgcacccgccagcagaactgccagattgaccggacc
agccgcaaccgctgccagcactgccgcctccagaaatgcctcagcctcggcatgtcccgg
gatgccgtcaagttcgggcgcatgtccaagaagcagcgcgacagcctccacgctgaagtg
cagaagcaactgcagcagcagcagcagcagcagggtggggaggcagccatggcctctgca
tacgccctgggcctggccaacgggcagcttaagttggcctcggaccctgacctgctggag
gcctcggcctgccctggtgccctcctagctgggcaggcacggctcggccgggtgcccgaa
gagccaccagcgctggccttctccaacggactggccaaggcccacggccggctgggtggt
gacccgtgtggccccttcgccagggagtacagccccgagcgtatcaagatggatgcccgg
ggcagcatcttctatgggccggatgcccaggcctcgcccgatcccaccaggctggacatc
ggggccaagcggggcccgggcagcagcaaccccggggagtccgtcgacttctacaccagc
cccagcttcaccagcatcctggagtctccccactcctcagtgaccgagatcgagcacctc
acccagaatgtcctcaagtcgtaccgcgagacctgccagctgcgcctggaggacctgcag
ctcctgcgctgggagaccttctcgcgggaggaggtcagcgcctaccagaagaagtccatg
gaggagatgtgggagcgctgcgcctgccgcatcaccgaggccatccagtacgtggtggag
ttcgccaagcgtatgggcggcttcatggagctgtgccaaaatgaccagatcgtgctgctc
aaagcaggtgccatggaagtggtgctggtgaggatgtgccgtgccttcaactcggagaac
aggacagtcttcttcgagggcaaatacgctggcccagagctcttcaagtccctcggctgc
aacgagctgatcaactccatcttcgacttcgcacatgggctgtgctccctgcacttcacc
gagaacgagatcgcactcttcaccgccctcgtgctcatcaacgccaaccgcccatggctg
caggagaagggcaaggtggagcggctgcaggacaatctggagctggccttcaaacacatg
ctgcgcaagagccaccgcgagggcctcctggccaagctgccgcccaagggcaagctgcgc
agcctgtgctgccagcacatggagaagctgcgctccttccggcagatgcacccaatcgtg
gtccatgccgtgttccccccgctctacaaggagctcttcagcgccgagggtgagccgcag
ggcctggtggccgagtga
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