KEGG   Alligator mississippiensis (American alligator): 109281289
Entry
109281289         CDS       T03087                                 
Name
(RefSeq) interferon type B-like
  KO
K05414  interferon alpha
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04060  Cytokine-cytokine receptor interaction
amj04217  Necroptosis
amj04620  Toll-like receptor signaling pathway
amj04621  NOD-like receptor signaling pathway
amj04622  RIG-I-like receptor signaling pathway
amj04623  Cytosolic DNA-sensing pathway
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    109281289
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    109281289
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    109281289
   04621 NOD-like receptor signaling pathway
    109281289
   04622 RIG-I-like receptor signaling pathway
    109281289
   04623 Cytosolic DNA-sensing pathway
    109281289
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109281289
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:amj04052]
    109281289
Cytokines and neuropeptides [BR:amj04052]
 Cytokines
  Interferons
   109281289
SSDB
Motif
Pfam: Interferon AD
Other DBs
NCBI-GeneID: 109281289
NCBI-ProteinID: XP_019335589
LinkDB
Position
Un
AA seq 186 aa
MACISVGARGGLWKICLVALLSAHVAALDCSNFRDLQKVLNRNSMQLLGQVAGAFPEECL
EDRPTFRFPDKVLRSKAPHNAWMATYEILQKLFSLFKRTLPETAWDTRSVERLLNAVHLQ
IKRLETCPPTNRLYPRSRNKATGLKKYFRKIDDFLRAKNYSKCAWEVVRIEAKTWFYYLD
KLKNRL
NT seq 561 nt   +upstreamnt  +downstreamnt
atggcgtgcatctctgttggagcccggggaggcctgtggaagatctgcctggtggcgcta
ttatcggctcatgtcgcagcgctggactgcagcaacttcagagacctgcaaaaagtgctc
aacaggaacagcatgcaactgctgggacaggtggccggagcatttcccgaggagtgtctg
gaggaccggcccaccttccggttccccgacaaggtcctgcggtccaaggctccacataac
gcctggatggccacctatgaaatcctccagaagctcttcagtctctttaaaaggactctc
cccgaaactgcctgggacacacgcagtgtggagaggctcctaaacgcggtccatctccag
atcaagcgactcgagacatgcccgcctacaaacaggctctatccgagaagccgaaacaaa
gctacgggactgaagaaatacttcagaaagatcgacgattttctccgagcgaagaactac
agcaagtgtgcttgggaggtggtccgaatagaagccaagacctggttttactatctggac
aagctcaaaaacaggctgtaa

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