Alligator mississippiensis (American alligator): 109282275
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Entry
109282275 CDS
T03087
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amj04515
]
109282275
Cell adhesion molecules [BR:
amj04515
]
Cadherins
Cadherin related
109282275
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
RET_CLD1
PepSY
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
109282275
NCBI-ProteinID:
XP_019339275
LinkDB
All DBs
Position
Un
AA seq
602 aa
AA seq
DB search
MGRLERTALLLLLLLLGSLRVGQASTVLGTLDLQIDEEQPAGTIIGDISAGLPPGTTAYM
YFISAQEGSGVATDLEINENTGIIKTARVLDRESRDHYSFIAVTPEGVTVEVNIQVNDIN
DHAPAFPRRRGALPIPEHTPAGSRFPLDPAFDSDSGQLNTQGYAIKGGNVGQAFRLETRR
GPNGVLQPELVVSGVLDRENRSSYALVLEAYDGGSPPRSTQMTLQVSVQDVNDNAPAFNQ
SRYHTLISENLKPGSSILQVFASDADEGDNGAVVYEINRRQSDPDQYFTIDARTGVIRLN
KGLDYELRKVHELVVQARDRAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPRISE
GAQPGQYVARISVSDPDYGEYANVNVSLEGGDGKFALTTKDNIIYLICVDQLLDREERDS
YDLRVTATDSGTPPLRAESAFVLQVTDVNDNPPLFDQQEYRQSIPEVVYPGSFVLQVTAR
DKDQGPNGEVRYSILQGPDAHASWFAIDPATGIITTAAPLDYEMDPQPQLTVLATDGGTP
TLSSTAVVFVVLQDVNDNEPVFKSNFYNVSLKENTPAGTCFLQVLRRPRPGLCPARWRCK
PA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggggcggctggaaaggacggccctgctgctgctgctgctgctgctggggagcctgcga
gtggggcaggcctccacggtgctgggcaccctggatctccaaatcgacgaggaacagccg
gcaggcactatcattggggacatcagcgccgggctgccccccggcaccactgcctacatg
tacttcatctcggctcaggagggtagcggcgttgccaccgacctggagatcaacgagaac
acgggcatcatcaagacagcccgcgtattggaccgggagagccgggaccattacagcttc
attgccgtcacccctgagggcgtcacggtggaggtgaacatccaggtgaacgacatcaac
gaccacgcgccggccttcccgcggcgccgcggcgccctcccgatccctgagcacacgcct
gccggcagccgcttccccctggaccccgccttcgactccgacagcggccagctgaacacc
cagggctacgccatcaaggggggcaacgtggggcaggcctttcggctggagacacgtcgc
ggccccaacggggtcctgcagccagagctggtggtgagcggggtgctggaccgggagaac
cgctcgtcctatgccctggtgctggaggcctacgacggtggctccccaccccggagcacc
cagatgaccctgcaggtatccgtgcaggacgtcaacgacaacgcgcccgccttcaaccag
agccgctaccacaccctcatctccgagaacctgaagcctggcagcagcatcctgcaggtc
ttcgcctccgatgcagatgagggcgataatggggctgtggtgtacgagatcaaccggcgc
caaagcgaccccgaccagtacttcaccatcgacgcgcgcaccggcgtcatccggctcaac
aaggggctggactacgagctgcgcaaggtgcacgagctggtggtgcaggctcgggaccgg
gccgtgcaccccgaggtcaccacagcctttgtcaccatccatgtgcgtgactacaatgac
aaccagcccaccatgaccatcatcttcctgagcgaggacggctcgccccgcatctccgag
ggggcgcagcctggccagtacgtggcccgcatctccgtctcggaccctgactacggcgag
tatgccaacgtcaacgtctccctggagggcggtgacggcaagttcgcgctcaccaccaag
gacaacatcatctacctgatctgcgtggaccaactgctggaccgggaggagcgggactcc
tacgacctgcgcgtgacggccaccgactcggggacaccaccgctgcgggcagagtctgcc
ttcgtactgcaggtgacggacgtcaacgacaacccgccgctcttcgaccagcaggagtac
cggcagagcatccccgaggtggtgtacccgggcagctttgtcctgcaggtgaccgcccgg
gacaaggaccagggcccgaacggggaggtgcgctacagcatcctgcagggccctgatgcc
catgccagctggttcgccattgaccccgccacgggcatcatcaccactgctgcccccctg
gattacgagatggacccccagccccagctgacagtgctggccacggatggtgggacgccc
acgctttcctccacggctgtggtgtttgtggtgttgcaggatgtcaacgacaacgagccc
gtattcaagagcaacttttacaacgtgtcgctgaaggagaacacacctgctgggacctgc
ttcctacaggtgctgcgcagaccccggccgggattgtgccctgcacgctggcgctgcaaa
cctgcatga
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