Alligator mississippiensis (American alligator): 109282346
Help
Entry
109282346 CDS
T03087
Symbol
USE1
Name
(RefSeq) unconventional SNARE in the ER 1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109282346 (USE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
109282346 (USE1)
Membrane trafficking [BR:
amj04131
]
SNARE
SNAP-25[C] (Qc)
Use1
109282346 (USE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Use1
MCU
DUF7610
EssA
DUF4870
AAR2
DUF4407
Synaptonemal_3
Prominin
DUF2207_C
FapA
CCB2_CCB4
NEDD4_Bsd2
DUF6548
Orf78
Motif
Other DBs
NCBI-GeneID:
109282346
NCBI-ProteinID:
XP_019339627
LinkDB
All DBs
Position
Un
AA seq
259 aa
AA seq
DB search
MAATRLELNLVRLLSRCEALAAERRHPGEWRLEQYVGALEEMLLELKTRSSKPAPELLNE
YSRKVDFLKGLLEAEKLSSSTEKALANQFLAPGRTPTTAKERAPATKTVHLRTKARCTDN
MRSELLGTDPLSINDSEEPNIRKRKGLEPDEKQSATELDAVLQHHQNLQEKLAEEMLSLA
RSLKNNTLAAQNVIKQDNQTLSQSLRMADHNFEKLKDESERLEQHAKKSVNWLLWIMLII
VCFIFISMILFIRIFPKLR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgcggctggagctgaacctggtgcggctgctgagccgctgcgaggcgctg
gcggccgagcgccgccacccgggcgagtggcggctggagcagtacgtcggtgccctcgaa
gagatgctcctcgagctcaagactcgctccagcaagccggcccccgagctgctgaacgag
tactcccgcaaagtggatttcttaaagggacttctggaagctgaaaaattgtcgtcatcc
actgagaaggcactggcaaatcagttcctggctccgggacgaactcccactacggccaaa
gagcgagcaccggccactaaaacagttcacctgcggacgaaagctcgctgtacggacaac
atgaggagtgagctgctcggcacagatcccttgtccatcaacgattctgaggagccgaac
ataaggaagcgcaaaggacttgaacctgatgagaaacagtcggcaactgagctggatgcc
gtgttgcagcatcatcagaacctgcaagagaaattagcagaagaaatgctgagtttggct
cgcagtctcaaaaacaacactttggcagcacagaacgttattaaacaagataaccagacg
ttgtctcagtccctcaggatggcggaccataactttgagaagctgaaggatgagtctgaa
cgtcttgagcagcatgcaaagaaatctgttaactggttgctgtggataatgctaatcata
gtgtgttttattttcatcagcatgatcctctttatcagaattttccctaaactgagatga
DBGET
integrated database retrieval system
