Alligator mississippiensis (American alligator): 109282356
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Entry
109282356 CDS
T03087
Name
(RefSeq) protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
109282356
Transcription factors [BR:
amj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109282356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
109282356
NCBI-ProteinID:
XP_019339671
LinkDB
All DBs
Position
Un
AA seq
969 aa
AA seq
DB search
MKPAARKAASSSPASSTGSGSHSPPSTRAKAQRRRPAEGGPRLEEEEEGGGSEDAPDQPP
VFPGARCTMEPTLGPPVEAPEAEGAPGPDGEPSPNRKTAAFKARTPRRKAVGPGEDWSGS
EGSAAPPEDEPGGRCPSSSTDTASEHSADEEAKAGPVAQPWGPTPQPAPYDLHQLRSQRV
LARRDGLFQPAVVKQIRRGQDLGVQFGGDRAVTYYEGALSAGAPDVVLDATPPPGAVVVG
TPVCACVDPGETAYREGTVVEVSVKPASYKVRFGLSPGPSPSPRRDSAWVPRSGLRLLRP
PWARAEPEKPAGEVEDEAPGPEAKQPEDAEVSKISAGAGEPPAPILRPLSPPKSPGLPRL
PEAPSPPSGAEAGGSRSSSGLSGEKGAAPGPPGPGPGRRTPLTAAQQKYKKGDVVCTPNG
IRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKELEGLEGSGRGSGLREGSAEFD
WDDTSRDSEASSARGDSRPRLAPTDLSRFELDECEAAVMLVSLGSSRSGTPSFSPGSNQS
PFSPAPSPSPSPLFGLRPASFSPITASPVIQRAAARSRHVSASTPKGTVLSPELLPPGAR
ERHPSGLLPSFQTSLTFTVPVSPGKRRPEPPAPGAEPHKPEGAGGPEESSTGGFRVVSPA
APGAFGRSRQASPLLLQTEPHPAVRRVPAVQRDSPVIVRNPDVPLPSPFAEKLPERPGSP
RRGPPGPHDAPKAPLQAPVPINAGRGLPACPPSGAPPAPEPPVPVFGVSSPFQPVAFHPS
PAALLPVIVPGDYVGPPAPRKDIIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQPDCS
VQPTEGQQPVGHPATTAHNKEPPESAAVAPDLSGALGAEPGRLGASCSDGPAPAAPQAHA
GAAPTHEDEAPGPLRLDSETESDHDDAFLSTVSPEMQLPLAPGKRRTQSLSALPKDRDSD
KDGRSPNKV
NT seq
2908 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgcggcgaggaaggctgccagctcctcacccgcgtccagcacaggcagtggc
agccactctcccccctccacccgagctaaggcccagcggcgccgcccggctgaggggggc
ccgaggctggaggaggaagaggagggcgggggcagcgaggacgctcctgaccagccacct
gtcttccccggagcccgctgcaccatggagcccaccctgggcccacctgtagaggccccc
gaggcagagggagcgccagggcccgacggggagccctcccccaaccgcaagacagctgcc
ttcaaggcccgcacgccacggcgcaaagcggtggggcctggtgaggactggagtggcagt
gagggctcagctgcccccccggaggatgagcctgggggccggtgcccctcatccagcacg
gacacagccagcgagcactcggctgatgaggaggcgaaagcagggccggtggcacagccc
tggggcccaacgcctcaacccgcaccctatgacctgcaccagctgcgctcccagcgggtg
ttggcccggcgcgatgggctcttccagcccgccgtggtcaagcagatccgacgcgggcag
gacctgggtgtacagtttggcggtgaccgggctgtgacctactatgagggggcactgagt
gccggggccccagatgtggtcctggacgccacgcccccaccaggcgctgtggtcgtgggc
acgcccgtgtgcgcttgtgtggacccaggtgagacggcctaccgcgagggcactgtggtg
gaggtgagcgtcaagccagcctcctacaaggtgcggttcgggttgtcacctggccccagc
cccagcccgcgccgcgactcagcctgggtcccgcgctctggcctgcgcctgctgcgccca
ccctgggcccgtgctgagcctgagaagccggcaggtgaggtggaagatgaggcacccggt
cctgaggccaagcagcctgaggacgccgaggtctccaagatcagcgcgggtgcaggcgag
ccgccggcccccatcctgcgcccgctctcgccccccaagtcaccggggctgccccgcctg
cctgaggcgccgtcgccacccagcggtgctgaggcaggcggcagccgcagcagcagcggg
ctatccggggagaagggtgccgcaccagggccaccggggccgggcccagggcgccgcacg
ccattgactgcagcgcagcagaaatacaagaagggtgacgtggtatgcacacccaacggc
atccgtaagaagttcaatgggaagcagtggcggcgcctgtgctcgcgcgagggctgcatg
aaggagtcgcagcgacgtggatactgctcgcgccacctctccatgcgcaccaaggagctg
gaggggctggaaggcagtgggcgaggcagtggcctgcgcgagggcagcgctgagttcgac
tgggatgacacgtcgcgggacagtgaggccagcagcgcacggggcgactcacggccccgc
ctggcacccactgacctgtcgcgcttcgagctggacgagtgcgaggcagctgttatgctg
gtgtcgctgggcagttcacgctcaggcaccccttccttctcgcccggctccaaccagtcg
cccttctcgcccgcgccctcaccctcgccctcaccactctttggcctgcgccctgccagc
ttcagccctatcacagcctcacctgtcatccagcgtgcggccgcccgcagccgccacgtc
agcgccagcacgcccaagggcaccgtgctaagccctgagctgctgccgcccggcgcccgc
gaacgccacccctcaggcctactgccctccttccagaccagcctcaccttcaccgtgccc
gtcagccccggcaaacgccggcctgagcccccggcacccggggctgagcctcacaagcca
gagggtgcggggggccctgaggagtccagcactggcggattccgtgttgtgtcgccagct
gcgccaggcgcctttgggcgctcccgccaggcctcaccactgctgctgcagacggagcca
catcctgctgtgcggcgtgtgccagctgtgcagcgcgactcgcccgtcatcgtgcgcaac
cctgatgtgccactaccatccccctttgccgagaagctgcccgagcgccccggcagcccc
cgccgtggcccacctggccctcacgatgcgcccaaggccccactgcaggcacctgtgccc
atcaacgccgggcgggggctgccagcctgcccgcccagcggggccccccctgcgcctgag
ccacccgtgcctgtcttcggcgtctcctcacccttccagcccgttgccttccacccctcg
cctgctgcgctgctgcctgtcatcgtgccaggcgactacgttggccccccagctccacgc
aaggacatcatcatgggccgccctggcactgtgtggaccaacgtggagccgcgctctgtg
gctgtgttcccgtggcactcacttgtgcccttcctggcgccgagccagcctgactgctct
gtgcagcccaccgagggacagcagcctgttggccaccctgccaccactgcccacaacaaa
gaacccccggagtcggcggccgtggcccctgacctctcgggggcgctgggggcggagcca
gggcggcttggggcatcgtgctcggacggccctgcccccgctgccccccaggcccatgcg
ggtgctgcccccacacacgaggatgaggccccggggcccctgcgcctggacagcgagaca
gagagcgaccatgacgacgcgttcctgtctactgtgtcccctgagatgcagctgccactg
gcgccggggaagcgtcggacgcagtcactgagtgccctgcccaaggaccgtgactcggac
aaggatgggcgcagccccaacaaggtga
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