Alligator mississippiensis (American alligator): 109283478
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Entry
109283478 CDS
T03087
Symbol
TTC28
Name
(RefSeq) tetratricopeptide repeat domain 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
109283478 (TTC28)
Cilium and associated proteins [BR:
amj03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
109283478 (TTC28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
TPR_17
TPR_16
RPN7
TPR_11
TPR_NPHP3
TPR_9
TPR_19
TPR_6
ANAPC5
DUF3856
AP4E_app_platf
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
109283478
NCBI-ProteinID:
XP_019344213
LinkDB
All DBs
Position
Un
AA seq
1311 aa
AA seq
DB search
MGTAWDLTGHAQWWKTCPVQLQGRTFDLAACILKIPFFGSKSFGGRSPDSPMLSKAEFVE
KVRQSNQACHDGDFHTAIMLYNEALGVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARL
LNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRESLE
PTYQQLQKMKLDKSPFVVVSVIGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSAL
SSAYWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQ
LVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNM
GAVYIAMGDFENAVQCHEQHLGIAKAMGNQREEARAYSNLGSAYHYRRNFDKAMSYHNHV
LELAQELAEKAIEMRAYAGLGHAARCMQDLERAKQYHEEQLRIAESLQDRAAEGRASSNL
GIIHQMKGDYDTALKLHKTHLSIAQELNDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQE
LQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNL
GNFHCSRGEYVQAAPYYEQYLRLSPELQDMEGEGKVCHNLGYAHYCLGNYEEAVKYYEQD
LALAKDLHDKLSQAKAYCNLGLAFKALMDFGRAEECQKYLLSLAQSLNNSQAKFRALGNL
GDIFVCKKDVNGAIKFYEQQLSLAHHVKDRRLEASAYAALGSAYRMIQKCDKALGYHTQE
LEVYQELGDMPGECRAHGHLAAVYMSLGKYTMAFKCYEEQLELGQKLKDPSIEAQVYGNM
GITKMNMNVMEEAIGYFEQQLAMLQQLSGNEAVLDRGRAYGNLGDCYEALGDYEEAIKYY
EQYLSVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAY
GELGSLHSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGGVYQQMGEYDTALQYH
QLDLQIAEETNNPTCQGRAYGNLGLTYESLGTYERAVVYQEQHLSIAAQMNDLVAKTLSY
SSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEESQHQL
YRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAF
ADLLVERQTGQQDSDPYSPVTIEQVLETVNGQRGLVLYYSLAAGYLYSWLLAPGAGILKF
HECYLGDSAAETAGDFHEAGSVNLQAATSSGLEMYISSVREALGVDSYYTR
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgggcacagcgtgggatcttacagggcacgcacaatggtggaagacttgtccagtgcag
ctccaaggaagaacatttgacttagcggcctgtatcctgaagatccctttctttggctca
aaatcttttggaggaagaagcccggacagccccatgttgagcaaggctgaatttgttgag
aaggttcgccagagcaaccaggcctgccacgatggcgactttcacacggctatcatgctg
tacaacgaggccctgggagtcgatcctcagaactgcatcctctacagtaaccggtctgca
gcgtacatgaagatccagcagtatgacaaggcgctcgatgatgcaatcaaagcacgactt
ctcaatcctaaatggcccaaggcatacttccgacagggtgttgcccttcagtaccttggg
cgccatgcggatgcactggcagctttcgcgtcggggttggctcaggaccccaagagcctg
cagcttctggttgggatggtggaagccgccatgaagtctcccatgcgagagtccctcgag
ccgacgtaccagcagctgcagaagatgaagctggacaagagcccctttgtggtggtgtcc
gtcattgggcaggagctcctgaccgcaggccatcacggtgcctctgtggttgtgttagaa
gctgccctgaagataggcacctgcagcctgaagctgaggggatcggtgttttctgcgctg
agcagcgcttactggtctctgggcaataccgagaaaagcaccggatacatgcagcaggac
ttggacgtagccaagactttaggtgaccagacgggagaatgccgagctcacgggaacctg
ggctccgcattcttctccaaaggaaactaccgagaggccctcactaaccacagacatcag
ctggtgctcgccatgaaactcaaggacagagaggcagcatcctcggccctgagcagcctg
ggccacgtgtacacggccatcggcgactaccccaacgcgctggccagccacaagcaatgc
gtcctgctggccaagcagtccaaggacgagctctcggaggcccgggagctgggcaacatg
ggggcggtgtacatcgccatgggggactttgagaacgccgtgcagtgccacgagcagcac
ctcggcatcgccaaggccatgggcaaccagcgcgaggaggcgcgcgcctacagcaacctg
ggcagcgcctaccactaccggcgcaacttcgacaaggccatgtcctaccacaaccacgtg
ctggagctggcccaggagctggccgagaaggccatcgagatgcgcgcctacgccgggctg
ggccacgccgcccgctgcatgcaggacctggagagggccaagcagtaccacgaggagcag
ctgcgcattgccgagagcctgcaggaccgagccgccgagggcagagcctcttccaaccta
gggataatccaccagatgaaaggcgactacgacaccgcgttgaaactgcacaagacccac
ctgtccatcgcccaggagctgaacgactacgccgcccagggcagggcctacggcaacatg
ggcaacgcctacaatgccttgggcatgtacgaccaggcggtgaagtaccaccggcaggag
ctgcagatctccatggaggtgaacgaccgggcctcccaggcctccacgcacgggaacctg
gcggtggcctaccaggctctgggcgcccacgaccgggccctgcagcactaccagaaccac
ctcaacattgcccgggagctgcgggacatccagagcgaggcccgggccctcagcaacctg
ggcaacttccactgctcgcgcggggagtacgtgcaggccgccccctactacgagcagtac
ctgcgcctctccccggagctgcaggacatggagggcgaggggaaggtctgccacaacctg
ggctatgcccactactgcctgggcaactacgaggaggcggtgaagtactatgagcaggac
ctggccctggccaaggacctgcacgacaagctgagccaagccaaggcctactgcaacctg
ggcctggccttcaaggccctgatggacttcggcagggccgaggagtgccagaagtacctg
ctctccctggcccagtccttgaacaattcccaggccaaattccgcgcgctggggaacctg
ggggacatttttgtctgtaaaaaggatgtaaacggtgcaataaagttctacgagcagcag
ctgagcttggcccatcacgtcaaggacaggaggctggaggccagcgcctacgcggccctg
ggctctgcctaccgcatgatacagaagtgcgacaaggctttgggctaccacacgcaggag
ctggaggtgtaccaggagctgggggacatgccgggcgagtgccgagcccacggccacctc
gcggccgtgtacatgtccctggggaagtacaccatggcgttcaagtgttacgaggagcag
ctggagctcgggcagaagctgaaggaccccagcatcgaggcccaggtctacggcaacatg
ggcatcaccaagatgaacatgaacgtcatggaggaagccatcggctacttcgagcagcag
ctggccatgctgcagcagctcagcggcaacgaggcggtgctggaccgaggccgggcctac
gggaacctgggggactgctacgaggcgctgggggactacgaagaagccatcaagtattac
gagcagtacttgtcggtagcgcagagcctgaatcgcatgcaggaccaggccaaggcctac
cggggcctgggcaacgggcacagggccatgggcagcttgcagcaggcgctcgtgtgcttc
gagaagcggctggtggtggcgcacgagctgggcgaagccttcaacaaggcgcaggcctac
ggggagctgggcagcctgcacagccagctgggcaactacgagcaggccatctcctgcctg
gagcgccagctcaacatcgcccgggagatgaaggaccgggccctggagagcgacgcggcc
tgcggcctggggggcgtctaccagcagatgggcgagtacgacacggcgctgcagtaccac
cagctggacctgcagatcgccgaggagaccaacaaccccacgtgccagggccgggcttac
gggaacctggggctcacctacgagtcgctgggcacctacgagagggccgtggtgtaccag
gagcagcacctcagcatcgccgcccagatgaacgacctggtggccaagacgctgtcctac
agcagcctcgggcggacgcaccacgccctgcagaactactcgcaggccgtcatgtacctg
caggaaggcctgaggctggcggagcagctgggccgcagagaggacgaagccaaaatccgc
cacggcctgggcctctccctctgggcgagcgggaacctggaggagtcgcagcaccagctc
tacagggcgtccgcgctgtttgagaccatccggcacgaggcgcagctgagcaccgactac
aagctgtcgctcttcgacctgcagacgtcgtcctaccaggccttgcagcgggtcctcgtc
agcctgggccaccacgatgaagccttggccgtggcagagagagggaggacaagggcgttc
gcggatctgctggtggagcgtcagacggggcagcaggactccgacccctattctccagtg
accatcgagcaggttctggagacggtgaacgggcagaggggacttgttctctactactcg
ctggcggcaggctacctgtacagctggctgctggcccccggggcagggattctgaaattc
catgagtgctacctgggggacagcgcggcggagaccgccggggacttccacgaagccggc
agcgtgaacctccaagcagccaccagctccgggctggagatgtacatctccagtgtgcga
gaggcactgggcgtggactcctactacacccggtga
DBGET
integrated database retrieval system
