KEGG   Alligator mississippiensis (American alligator): 109284002
Entry
109284002         CDS       T03087                                 
Name
(RefSeq) C-type lectin domain family 7 member A-like
  KO
K08763  oxidised low-density lipoprotein receptor 1
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03320  PPAR signaling pathway
amj04145  Phagosome
Brite
KEGG Orthology (KO) [BR:amj00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109284002
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    109284002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amj04131]
    109284002
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:amj04054]
    109284002
   04091 Lectins [BR:amj04091]
    109284002
Membrane trafficking [BR:amj04131]
 Endocytosis
  Phagocytosis
   Scavenger receptors
    109284002
Pattern recognition receptors [BR:amj04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   109284002
Lectins [BR:amj04091]
 C-Type lectins
  NK cell receptors
   109284002
SSDB
Motif
Pfam: Lectin_C
Other DBs
NCBI-GeneID: 109284002
NCBI-ProteinID: XP_019346548
LinkDB
Position
Un
AA seq 230 aa
MKTPLSVRCPAQTQTQPFQKCHRINLLTKKCPGQWSHSESRSYLFSPEKRPWAECKSSCH
SLSASLLTIDSKVEMNFINTELFHYYEDRGSSLYYFQFWTGLSYYSEIRKWIWADGTILS
SGLIQLPDPSHGTDAGGACVYLQVGAVKLGRCEEALFCICEKMKKPPATNASVSKGKSPV
RSKTSTSAKQRLPWSNGGNLQTDGSMFERKVVGYFHRNIKLGKMLQEKQA
NT seq 693 nt   +upstreamnt  +downstreamnt
atgaaaaccccactcagtgtccggtgtcctgcccagacccaaacacaaccgttccagaaa
tgccacaggatcaacctcctgacaaagaagtgtccggggcagtggagtcacagcgagagc
aggtcctacctcttttctcctgaaaaaagaccatgggcagagtgtaaatcctcctgccat
tctctctctgctagcctgctcacaattgatagcaaagtcgagatgaacttcatcaacaca
gagttatttcactattatgaagatcgtggaagcagtctgtactacttccagttctggact
ggattgtcgtactactctgaaataaggaagtggatctgggcagacggcacaattctctcc
tctggcctgattcagctcccagaccccagtcatggaactgatgcaggtggcgcttgtgtg
tatctccaagttggggcagttaagctgggcaggtgtgaagaagctctattctgcatttgt
gaaaagatgaagaaaccacctgccaccaatgcgagtgtgtccaaagggaagtcccctgtt
cgctccaaaacctccacctctgcaaagcaaaggctaccctggagcaatgggggaaacctg
cagacagacgggagcatgttcgaaaggaaggtcgtgggttacttccaccgcaacatcaag
ctgggcaagatgctgcaggagaagcaggcatag

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