Alligator mississippiensis (American alligator): 109284796
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Entry
109284796 CDS
T03087
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109284796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
109284796
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109284796
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109284796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
PRY
U-box
TRAF3_RING
RRM_5
zf-Nse
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
109284796
NCBI-ProteinID:
XP_019349749
LinkDB
All DBs
Position
Un
AA seq
589 aa
AA seq
DB search
MNNTSLYFLKDKVMCPLCLELFTDPVTTACGHNFCMDCLQNYWDHQALIGESPYCPQCQE
PFSSRPRLCQNINLGEIAKLAQEVQAMTKLPPAGPNNIPCDFCSSGKLKPIKTCLQHTPS
LCETHTQLHYKDKVYRSHQLLEPISDLKARLCLKHHKLQKQNCRAEGSFLGHTRLQEGRR
NHEAVPLQGERATKAKPASHQGAELRSQQVLCSHPALGCHLPRAKEVENEQVQVNMENQI
IMMASDGHRHKERVIYLMRVVKNARDEVNQTFAEIIKELKIMQVKVLEFLDKEEKAALVQ
MGNSIQQNQVKLADLWKQSLWMTGLLENTSDQQFVQEFPKLKQLGACPERVVSLKCEESS
SFIGVKQMLSDLKAQLAVVALHFVNKILKTGITMQPYEVIPPNMDRKTLLKYYCNLNFDP
NTTSEELLLFKETHSVLNIGIMLESSSMPCQGFNHWPQVLCTQSLCGGCHYWEVEVSDSW
LCLGATYSYAHRTGKNYIYLIGRNSTSWCLEWDSLKFSVWHNNIQTVVKGSYYQTVGIFL
DYAAGSLTFYGVTNTMNLIYHFLTTFTEPLYPAAMVSGGGSLFLRQHQK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacacaagcttatattttctcaaggacaaagtcatgtgccccttatgcctggag
ttgttcactgaccccgtcaccacagcctgcgggcacaacttctgcatggactgcctgcag
aactactgggaccaccaagccttgatcggagagagcccctactgcccgcagtgccaggag
cccttcagttcaaggcctagactctgccaaaacatcaacctgggagaaatagcaaagctc
gcccaggaggttcaggccatgaccaagcttcccccagcaggtcccaacaacatcccctgc
gatttctgctcctctgggaaactcaagcccatcaagacctgcctccagcatacaccctcc
ttgtgcgagacccacacccagctacactacaaagacaaggtatacaggagccaccagctg
ctggagcccatcagtgacctgaaagccaggctgtgcctcaagcaccacaagctgcagaag
cagaactgccgggcagagggcagcttcctcggtcacacccgcctccaggaggggcgcagg
aaccacgaggcagtccccttgcagggggagagagccacgaaggcgaagcccgcatctcat
cagggagcagagctgagaagtcagcaggtgctttgcagccatcctgccctgggctgccat
ctccctagagccaaggaggtggaaaacgagcaagtacaagtcaacatggaaaaccagatc
atcatgatggcctccgatggtcataggcacaaggaaagggtcatctacctcatgagagtg
gtcaagaatgcacgagatgaggtgaaccagacctttgcagagattatcaaggagctcaag
atcatgcaggtgaaggtgctggagtttttggacaaggaggagaaagcagctctcgtccag
atggggaactccattcagcagaatcaagtgaagctggccgacctttggaagcaaagcctt
tggatgaccggcctcctggagaatacaagtgaccagcagttcgtgcaggaattccccaaa
ctgaagcagctgggagcctgcccagaacgagtggtcagcctgaagtgtgaggagtcctcg
agtttcataggcgtcaagcagatgctgagtgatctgaaggcccagctagcagtggttgct
ctccacttcgtcaataaaatccttaagacaggcatcaccatgcagccctatgaggtgata
ccacccaatatggacaggaagaccctcctgaagtactattgcaacctgaactttgacccc
aacaccaccagcgaagagctgctgttgttcaaggagacccactcggtgctgaacattggc
atcatgctggagtcctcctccatgccctgccaaggattcaaccactggccacaggtcttg
tgcacccagagcttgtgcggaggctgccactactgggaggttgaggtctcagattcgtgg
ctctgcttgggagccacctacagttatgcgcacaggaccgggaagaactacatctacttg
ataggcaggaacagcacctcatggtgcttggagtgggactcgctcaaattctccgtctgg
cacaacaacatccagacagtggtgaagggcagctattaccaaactgtcgggatcttccta
gactatgctgctggctccctgactttctacggggtcaccaacaccatgaacctcatctat
cacttcctgaccacgttcacagaaccactgtaccccgctgccatggtgagcggcggaggt
tcgctgttcctgaggcagcaccagaagtag
DBGET
integrated database retrieval system
