Alligator mississippiensis (American alligator): 109286274
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Entry
109286274 CDS
T03087
Name
(RefSeq) dynein heavy chain 2, axonemal-like
KO
K10408
dynein axonemal heavy chain
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109286274
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
109286274
04812 Cytoskeleton proteins [BR:
amj04812
]
109286274
Cilium and associated proteins [BR:
amj03037
]
Motile cilia and associated proteins
Dynein arm
109286274
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
109286274
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_8
AAA_9
AAA_7
MT
Dynein_heavy
Dynein_AAA_lid
AAA_5
AAA_lid_1
AAA_lid_11
DYN_lid
AAA_22
AAA
Sigma54_activat
DUF3450
AAA_16
TsaE
Sigma54_activ_2
NB-ARC
AAA_25
nSTAND3
AAA_PrkA
Motif
Other DBs
NCBI-GeneID:
109286274
NCBI-ProteinID:
XP_019355504
LinkDB
All DBs
Position
Un
AA seq
1844 aa
AA seq
DB search
VSLLFEVENLAVASPATVSRCGVVYMDYSDLGWRPYVHSWIERRPKSEAETLQRMFDKFL
DKMLAFKRDNCCELVPVPEYSGVVALCRLFSALATPENGVNPADVESYGAVLEMYFLFSM
IWSVCAAVDEEGRKRIDAYIREMEGSFPNKDTVYEYFVDAKRKNWASFEDKLPKMWRYPP
TAPFHKILVPTMDTVRYNHLVTALLSAQSPVLLVGPVGTGKTSIAQGVLQGLDRTAWAVL
TVNMSAQTSSSNVQSAVESRVEKRTKGVYVPLGGKSLATFLDDLNMPARDAFGAQPPLEL
LRQWLDYGFWYDRAKQSPKYIKDMFLLAAMGPPGGGRTEISPRLQSRFNLINMTFPSDSQ
IRRIFGTLLNQKLQAFEESVKPLGPVVTEATVELYHSVAQRFLPTPACIHYLFSLRDIAK
VHFGVFQGLLRSHKDFHDTKTSLTRLWVHECFRVFADRLVDAGDAEAFTCIVGEKLGTFF
DLTFHGLCPSKRPPLFGDFLGARRVYEELADLGALRAEMEQVLAEHNQAPGAVPLRLVLF
RDAIEHIMRIVRVIGQPRGNLLLVGIGGSGRQSLARLASALCQYCTFQIQPARHYRRQDF
RDDLKRLYRQAGMELVPTTFLFTDSQASDEAFLEDINSLLSAGEVPALYRPDEWEEIQAL
LLDAAKAEGVPETPDSLFAFLIERVRDNLHVVLCLSPVGELFRNWIRQYPALVSCTTIDW
FSEWPRQALLEVAEKYLEGVDLGPQPEMARKVARIFTAVHGSVATYSQKMLVEMRRYNYV
TPSSYLELVSGYKKLLGEKRQELGQQAGRLRTGLARIDETRTKVEAMGAELAHAKCRVAE
VQRQCEEYLVVIVQQKREADEQQKTVTANSEKIAAEEVKCKALADNAQKDLEEALPALEE
AMKALESLNKKDMTEIKSYGRPPGLVETVMQAVMILRGSEPSWAEAKRQLSEPTFIKQLI
HFDKDNISDKVLKKIGGFCAQPDFQPDIVGRVSLAAKSLCMWVRAMEMYGRIYRVVEPKR
ARMNAAAAQLAEKQASQAEAQAKLREVAERLERLKQEYEEKLAQKEELRARSEDMELKLD
RADKLVSGLAGEKARWEETVQGLDEDLGYVVGDCLLAAAFLSYMGPFLSNYRDEIVSQIW
MKQIREEQVPCSPRFSLPGFLATPPTVRTWTLQGLPSDAFSTENGLIVTRGTRWPLMIDP
QGQASKWIKNMEADKGLRILDLQGDYLGALAGAVQQGVPVLIHDLQEQLDPALTPLLGRA
VTRVGGRLLLRLGDREVEYSPAFRLYLTTKLSNPHYAPETAARAAIVNFAVKEQGLEAQL
LGIVVRKERPELEEQKDTLVLNIAAGKRRLQELEDEILRLLNEATGSLLDDLQLVTTLQS
SKVTAGEVSDQLATSEATEAKIDAAREAYRPCAQRAAVLFFVLMDMGRIDPMYQFSLDAY
VELFTLSIARSPRGARLDERIRCLNDHHTYAVYRYACRGLFECHKLLFSFHMCAKILEVA
GSLHTDEYSFFLRGGVVLDHEGQMDNPCPSWLPDAYWDNVTELDKLPSFHGIMNSFEQHP
RDWHLWYSSARPERALLPGEWENACGQLQRMLVVRALRPDRVGLCISAFVVSHLGSAFVE
PPVLSMKAVLEDSLPRTPLVFVLSPGVDPAPGLLQLAEQVGMALRLHALSLGQGQAPIAT
RMIQEGVRHGSWVFLANCHLSLSWMPQLAKLVEQLAAEDPHPDFRLWLSSSPHPGFPISV
LQAAIKVTTEPPTGLKANMTRLYQLVTEPQFGRCSRLARYKKLLFALCFFHSLLLERRQF
LQLGWNVIYGFNDSDFEVGVAGTRQVPHSVHMGGATGLGTGYVL
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
gtctcactgctctttgaggtggagaacctggcggtggcctctccagccacagtgtcccgc
tgtggcgtggtctacatggactacagtgacctgggctggaggccctatgtccactcctgg
attgagcggcgccccaagagtgaggctgagaccctgcagcgcatgttcgacaagtttctg
gacaagatgttagccttcaagagagacaactgctgcgagctggtccccgtgcctgagtac
agcggtgttgtggccctctgccgcctcttttcagccctggccacgcctgagaatggggtg
aacccggcggatgtagagagctacggtgcagtgctggagatgtacttcctgttcagcatg
atctggtcagtgtgtgcggctgtggatgaggagggccgcaagcggattgatgcctacatc
cgtgagatggagggctccttccccaataaggacacagtctacgagtactttgtggatgcc
aagaggaagaactgggcctcgtttgaggacaagctgcccaagatgtggcgctacccgcct
actgcccccttccacaagatcctggtgcccacgatggacacggtgcgctacaaccacctg
gtgacggcgctgctctcagcccagagccctgtgctgctggtcggccccgtgggtaccggc
aagacctccatcgcccagggcgtcctgcagggcctggaccgcactgcctgggctgtgctc
accgtcaacatgtctgcccagacctcatccagcaatgtgcagagcgccgtggagagtcgt
gtggagaagcgtaccaagggcgtgtatgtgccgctgggtggcaagagcctcgccaccttc
ctggacgacctcaacatgccggcacgtgatgccttcggggcacagccccccctcgagctg
ctgcgccagtggctggactacggcttctggtacgaccgggccaagcagagccccaagtac
atcaaggacatgttcctcctggcagccatgggcccccctgggggaggccgcaccgagatc
tccccccggctccagagcaggttcaacctcatcaacatgaccttcccctcggactcccag
atccgccgcatctttgggacactgctgaaccagaagctccaggcctttgaggagagtgtg
aagccactggggccagtggtgacagaggccacggtggagctgtaccacagtgtggcgcaa
cgcttcctgcccacacctgcctgcatccactacctgttcagcctgcgcgacattgccaag
gtccacttcggggtgttccaggggctgctgcggtcgcacaaggatttccatgacaccaag
accagcctcacccgcctctgggtgcatgagtgcttcagggtctttgctgaccggctggtg
gatgcgggtgatgccgaggccttcacgtgcatcgtaggcgagaagctgggcaccttcttt
gacctcaccttccatggactctgcccctccaagcgcccgcccctcttcggggacttcctg
ggggcgcggcgggtgtacgaagagctggctgacttgggcgcgctgcgggctgagatggag
caggtgctggccgagcacaaccaggcacccggtgctgtgcccctacgcctcgtgctcttc
cgcgatgccatcgagcatatcatgcgcattgtgcgagtcattggacagccacggggcaac
ctgctactggttggcatcgggggcagcgggcgccagagtctggcgcgtctcgcctccgcc
ctatgccagtactgcaccttccaaatccagcctgcacgccactaccggcgtcaggacttc
cgcgatgacctgaagcggctgtaccggcaggcgggcatggagctggtgcccaccactttc
ctcttcaccgactcgcaggcatctgacgaggcctttctggaggatatcaacagcctgctc
agcgctggggaggtgcccgcattgtaccggcctgatgagtgggaggagatccaggcactg
ctcttggatgcagccaaggctgagggggtccctgagacacctgacagtctcttcgccttc
ctcattgagcgggtgcgcgacaacctgcatgtggtcctgtgcctcagccctgtgggcgag
ctcttccggaactggatccggcagtaccctgccctggtgagctgtactaccatcgactgg
ttctcggagtggccgcgccaggcgttgcttgaggtagccgagaaatacttggagggggtt
gacctggggccacagccagagatggcccggaaggtggcccggatcttcacagccgtgcat
ggctccgtggccacctactcccagaagatgctggtggagatgcggcgctacaactacgtc
acccccagcagctacctggagttggtctcgggctacaagaagctgctgggtgagaagcgg
caggagctgggccagcaggctgggcggctgcgcacggggttggcacggattgacgagaca
cgcaccaaggtggaggccatgggagcagagctggcacacgccaagtgccgcgtggctgag
gtgcagcgccagtgcgaggagtacctggtggtcatcgtgcagcagaagcgtgaggccgac
gagcagcagaagacggtgacagccaacagcgagaagatcgcggctgaggaggtgaagtgc
aaggcgctggccgacaatgcacagaaggacctagaggaggcgctgccagcactggaggaa
gccatgaaggcactggagtcactgaacaagaaggacatgacagagatcaagtcatacggg
cgcccaccggggctggtggagactgtcatgcaggccgtcatgatcctgcgcggcagtgag
cccagctgggctgaggccaagcgccagctaagtgagccaaccttcatcaagcagctgatc
cactttgacaaggacaacatctcagacaaggtgctcaagaagattgggggcttttgtgcc
cagcccgacttccagcccgacatcgtgggccgcgtctcgctggccgccaagtccctctgc
atgtgggtccgcgccatggagatgtatgggcgcatttaccgtgtggtggagcccaagcgt
gcacgcatgaacgcagccgcagcccagcttgccgagaagcaggcgtcacaggctgaagcc
caggccaagctgcgcgaggtggcagagaggctggagcggctgaagcaggagtatgaggag
aagctggcacagaaggaggagctgcgggcgcgctcggaggacatggagctcaagctggac
cgggctgacaagctggtgtcagggcttgcgggcgagaaggcccgctgggaggagaccgtg
cagggcctggacgaggacctgggctatgtggtgggtgactgcctgctggctgctgccttc
ctgtcctacatggggcccttcctctccaactaccgcgacgagatcgtctcccagatctgg
atgaagcagatccgggaggagcaggtgccctgctcgccacgcttctcgctgcctggcttc
ctggccaccccaccgacagtgcggacctggacgctgcaggggctgccctctgatgccttc
tccactgagaacgggctcatcgtcacccgtggcacccggtggccactcatgattgacccc
cagggccaggcctccaagtggatcaagaacatggaggcagacaagggcctgcgtatcttg
gatctgcagggcgactacctgggggcgctggcgggggctgtgcagcagggggtgccggtg
ctgatccatgacctgcaggagcagcttgaccctgcgctcacacccctgctgggccgtgct
gtcaccagagtgggtggccggctgctgctgcgcctgggggaccgggaggtggagtacagc
cctgccttccgcctctacctcaccaccaagctgtccaacccacactatgcacccgagaca
gctgcccgcgccgccattgtcaacttcgctgtcaaggagcagggcctggaagcacagttg
ctgggaattgtggtacgcaaggagcgcccagagctggaggagcagaaggacacattggtg
ctcaacattgcagccggcaagaggcggctgcaggagctggaggatgagatcctcaggctg
ctgaacgaggcaacagggtcactgctggatgacttgcagctggtgacgaccctgcagagc
tccaaggtgacggccggtgaggtcagtgaccaactggccaccagcgaggccacggaggcc
aagatcgatgccgctcgcgaggcgtaccggccatgcgcccagcgggcagccgtgctcttc
tttgtgctgatggacatggggcgcattgaccccatgtaccagttctcgctggatgcctac
gtggagctcttcaccctcagcattgcccgcagcccccgcggtgcccgcctggacgagcgc
atccgctgtctcaatgaccaccacacctacgccgtctacaggtacgcctgccgcgggctc
tttgagtgccacaagctgctctttagcttccacatgtgtgccaagatcctggaggtggct
gggagcctccacacggatgagtacagcttcttcctgcgcgggggcgtggtgctagaccat
gaggggcagatggacaacccgtgcccatcctggctgcccgatgcctactgggacaatgtg
acagagctggacaagttgccgagcttccatggcatcatgaactccttcgagcagcaccca
cgtgactggcacctctggtacagcagtgcccggcctgagcgggccctgctgccaggggag
tgggagaacgcgtgcgggcagctgcagcggatgttggtggtgcgggcactgcgccctgac
cgcgtggggctctgcatcagtgccttcgtcgtctcccatctgggctctgcctttgtcgag
ccacctgtgctctccatgaaggccgtgttggaagactcgttgccacggacgccgctggtg
tttgtgctgtcgcccggtgtggacccggcaccagggctgctgcagctggcggagcaggtg
ggcatggccctgcgcctgcacgccctctcactgggccagggccaggcccccattgccacc
cgcatgatccaggagggcgtgcgccacgggagctgggtgttcctcgccaactgccacctg
tcactatcgtggatgccgcagctggcaaagctggtggagcagctggcagccgaggacccg
caccccgacttccgcctgtggctcagctccagcccccatcctggcttccccatttctgtg
ctgcaggctgccatcaaggtcaccaccgagccacccacgggcctgaaggccaacatgacg
cgcctgtaccagctggtgacggagccgcagtttgggcgctgcagccgcctggcacgctac
aagaagctgctcttcgccctctgcttcttccacagtctcctgctggagcggcgccagttc
ctgcagctgggctggaatgtcatctatggcttcaatgactccgatttcgaggtaggtgta
gcgggcacacgccaagtgccacacagtgtgcacatgggaggtgctacaggcctggggaca
ggctatgtgctatag
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integrated database retrieval system
