KEGG   Alligator mississippiensis (American alligator): 109286522
Entry
109286522         CDS       T03087                                 
Name
(RefSeq) flap endonuclease 1-like
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03030  DNA replication
amj03410  Base excision repair
amj03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109286522
   03410 Base excision repair
    109286522
   03450 Non-homologous end-joining
    109286522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amj03032]
    109286522
   03400 DNA repair and recombination proteins [BR:amj03400]
    109286522
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amj04147]
    109286522
DNA replication proteins [BR:amj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    109286522
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     109286522
DNA repair and recombination proteins [BR:amj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     109286522
Exosome [BR:amj04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109286522
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5
Other DBs
NCBI-GeneID: 109286522
NCBI-ProteinID: XP_019356470
UniProt: A0A151MG47
LinkDB
Position
Un
AA seq 343 aa
MPHILNRRGEEISPLQGLFYRTLHLLESGIKPVFVFDGQAPALKQPVLARRAEAAAARRG
ASDPGTAETQWRRLREDCKTLLGYLGVPCVQAPSEAEATCAALAKSGLVWATATEDMDAL
AFGSPRLLRHLRVTGSGEVEEISLPHVLQRLDMTPEQFVDLCILLGCDYCGKVRGLGPKK
ALRLLRQHGSIEQLLQHLDPQSWAHFGHGWSSLGGTGCCHVRLLQKHPLPEHWDLAGARR
LFLQPTVADVAQVTLEWRDPEPEALVQFLAHEKHMSEVRVRRRLDRWLETQRQEAEEQPE
APACERQPLLGEFFPASKRGHPREGPCTRSSTKRQKEMLAEEP
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgccacacatcctcaaccggcgcggggaggagatcagtcccttgcaggggctgttctac
cggacgctgcatctgctggagagcggcatcaagccggtgttcgtgttcgacgggcaggcg
cccgccctcaagcagcccgtgctggcccggcgggccgaggcggccgcagcgaggcgaggt
gcctcagaccctggcacggctgaaacccagtggaggcgtttgagggaggactgcaagacc
ctgctgggctacctgggggtcccgtgcgtgcaggctccatcggaggcagaagccacgtgt
gcggccctggctaagtctggcctggtctgggccacagccacggaggacatggacgccctg
gccttcgggagcccccggctgctccgtcatctgcgcgtcactggcagtggcgaggtggag
gagatctccctgccccacgtgctgcagcggctggacatgacccccgagcagttcgtggac
ctgtgcatcctgctgggctgtgactactgtgggaaggtgcggggcctgggccccaagaag
gcgctgcgtctgctgcggcagcacggctccatcgagcagctgctccagcacctcgatccc
cagagctgggcgcattttggccatgggtggagctctctgggagggacggggtgctgtcac
gtgcggctgttgcagaagcacccgctgcccgagcactgggacctggcaggagctcgccgc
ctcttcctgcagcccacggtggccgacgtggcccaagtcacgctggagtggcgggacccc
gagcccgaggcgctggtgcagttcctggcccatgagaagcacatgagcgaggtgcgggtg
cgccggcggctggaccggtggctggagacgcagcgccaggaggcggaggagcagcccgag
gccccagcgtgcgagcggcagccactgctgggggagttcttccccgccagcaagcgtggg
cacccgcgggaggggccctgcacccggtccagcacgaagcgtcaaaaggagatgctggcg
gaggagccctga

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