Alteromonas macleodii Black Sea 11: AMBLS11_00760
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Entry
AMBLS11_00760 CDS
T02260
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amk
Alteromonas macleodii Black Sea 11
Pathway
amk03420
Nucleotide excision repair
amk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMBLS11_00760
03430 Mismatch repair
AMBLS11_00760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amk03400
]
AMBLS11_00760
Enzymes [BR:
amk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMBLS11_00760
DNA repair and recombination proteins [BR:
amk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMBLS11_00760
MMR (mismatch excision repair)
Other MMR factors
AMBLS11_00760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AFT76746
LinkDB
All DBs
Position
complement(182736..184907)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSRLLDELNDKQREAVAAPLSNALVLAGAGSGKTRVLVHRIAWLMEVENIAPFSILAV
TFTNKAAKEMRGRIESLMGRSLHNMWIGTFHGLAHRLLRAHHAEANLPENFQIIDSDDQY
RLIRRILKAMNLDEKHWAPRQIQWYINGNKDEGLRPQHIETHCDHIQKTMREVYAAYQDA
CDRSGLVDFAELLLRAHELWAKNPEVLAHYQRRFRAVLVDEFQDTNNIQYAWLRMLCSGG
NNNIMIVGDDDQSIYGWRGANVDNIQHFLKDFNEPTTIRLEQNYRSTGNILKAANTVIDN
NTGRLGKELWTEDAQGELISVYAGFNELDEARFIVSKIKDWLNQGNALSDTAILYRNNAQ
SRVLEEALLHEGLAYRIYGGLRFFERQEIKDALGYMRMVSHPHDDAAFERVVNTPSRGIG
EKTLSQVRDTARMHNCSMWQACQLLINEGGFKGRALNAMQSFVLLITELEQATLDEPLDQ
QADKAIRQSGLYAMYQAERGEKAQARLENLEELVTACKTFIVPEEAEEMSPLAAFLAHAS
LEAGETQADKDQDAVQMMTIHTAKGLEFPLVFLAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMQKLYITYAESRRLYGQDKYHTASRFIREMPADCVEEVRLKSTISRPVHNRFS
QATSHASFEETGFSLGERVVHRKFGEGIVLNYEGSGEHGRVQVNFDEFGSKWLVLAYAKL
EKA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctcgactgctagacgagctaaacgacaaacagcgtgaagcagtagcagcc
ccactatctaacgccctagtattggccggcgctggcagtggtaaaacccgcgtattagtg
catcgcattgcgtggttaatggaagtcgaaaacatcgcccctttttctattttggcagtg
acctttaccaataaagcggccaaagaaatgcgcggccgtatagagtcgttgatgggtcgc
agcttgcacaatatgtggattggtaccttccacgggcttgcacatcgcctgttacgtgca
caccacgcagaagcaaatttgcctgagaattttcagataatcgattcggacgatcagtac
cgactcattcgccgcattcttaaggccatgaacctggacgaaaagcactgggcgcctcgt
caaatacagtggtacataaatggcaataaggacgaaggcttgcgcccccagcacattgaa
acccattgcgatcatattcaaaaaaccatgcgcgaagtctatgctgcttatcaggacgct
tgtgaccgttcaggcctggtggattttgctgagctgttgctacgcgcccatgaattatgg
gctaaaaacccagaagtattagcgcattatcaacgtcgtttccgtgcagtattggttgac
gaattccaagataccaacaatatccaatatgcctggcttcgtatgctgtgcagtggcggc
aataacaacattatgattgttggtgatgacgaccaatctatttacggctggcgtggcgct
aatgtagataatattcagcacttcctgaaagacttcaacgagcctaccactattcgcctt
gagcagaattaccgttctaccggaaacattcttaaggcagcgaatacggttatcgacaac
aatactggccgtttagggaaagagctttggacggaagacgcacaaggcgaactgatttct
gtctatgcgggttttaacgagctagatgaagcgcgctttattgtttcgaaaatcaaagat
tggcttaatcagggcaacgcccttagcgataccgccattctttaccgaaacaacgcgcag
tcacgtgtgctggaagaagctttactacacgaagggttagcctatcgcatttacggtggt
ctgcgcttcttcgaacgccaagaaattaaagacgcccttggctacatgcgcatggtaagc
cacccgcacgatgacgctgcatttgagcgcgtggtaaacaccccaagtcgcggcattggt
gaaaaaaccctttcgcaagtgcgcgacacagcgcgaatgcacaactgttcaatgtggcag
gcgtgccagttgcttattaacgagggaggctttaagggccgagccttaaacgcaatgcaa
agttttgtgttgcttattacagagctagagcaagccacactagatgagcctcttgaccaa
caagccgacaaagctattcgccaatctggtctatacgccatgtaccaagcagagcgtggt
gaaaaagcgcaagcgcgactagaaaacttagaagaactggttactgcatgtaaaaccttt
atcgtacctgaagaagctgaagagatgtcgcctttagcagcatttctagcccatgcttca
ttggaagcaggtgaaactcaagcagataaagatcaagacgcggtacagatgatgactatt
cacaccgctaaaggcctcgaatttccgttggtatttttagctggcgtggaagaagggatg
tttccaagccaaatgaccaacgacgaaccgggtcgaatggaagaagaacgaagactttgc
tatgttggaatgacaagagctatgcaaaagttgtatatcacttatgcagaaagtcgtcga
ttatatggacaagataagtatcatactgcttctcgatttattcgtgaaatgccagcagac
tgcgtggaagaagtaaggctaaaatccacaatatcgcgtccggtacacaatcgctttagt
caggcgacatcgcatgcgagctttgaagagaccggctttagtttgggtgaacgggttgta
caccgtaaattcggtgaaggtattgtacttaactacgaaggtagtggtgagcatggccga
gttcaagtaaacttcgacgaatttggcagcaaatggctagtacttgcttacgcaaagctg
gagaaagcgtaa
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