Alteromonas macleodii Black Sea 11: AMBLS11_00790
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Entry
AMBLS11_00790 CDS
T02260
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
amk
Alteromonas macleodii Black Sea 11
Pathway
amk00300
Lysine biosynthesis
amk00470
D-Amino acid metabolism
amk01100
Metabolic pathways
amk01110
Biosynthesis of secondary metabolites
amk01120
Microbial metabolism in diverse environments
amk01230
Biosynthesis of amino acids
Module
amk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMBLS11_00790 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMBLS11_00790 (dapF)
Enzymes [BR:
amk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AMBLS11_00790 (dapF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AFT76752
LinkDB
All DBs
Position
complement(190305..191135)
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AA seq
276 aa
AA seq
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MQVQFSKMHGLGNDFMVIDNVTQNVFFSKEKIQQLANRNFGIGFDQLLMVEPPYDPEQDF
HYRIFNADGSEVEQCGNGARCFARFVKQKGLINRNKIVVSTKAGKMVLYLEKDGQVTVNM
GKPEFEPANIPLKANKQENTYILRVGESTLFIGSASMGNPHCVMEVDDVDTANVAEIGPL
VEKHERFPEGVNVGFMQIINESHIKLRVFERGSGETLACGSGACAAVAIGQIQGKLGKDV
RVDLPGGTLRIRWPGPDNVLKMTGPAEHVYDGHINL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcaattttctaaaatgcatggtttgggtaacgacttcatggttattgataac
gttactcaaaacgtctttttctctaaagaaaaaattcagcaactggctaaccgaaacttc
ggcattggcttcgaccagctgttgatggtggaaccgccttacgatcccgagcaagatttt
cactaccgtatcttcaatgctgatggttcggaagtggaacaatgtggcaatggcgcgcgc
tgctttgcacgttttgttaagcagaaaggcctcattaaccgcaataaaattgttgtaagc
accaaggctggaaaaatggtgctttatcttgagaaagatggtcaggttaccgtaaacatg
ggtaaacctgagtttgaaccagcgaacattccccttaaagccaataagcaagaaaatacc
tatattttgcgtgtcggcgaaagcactttatttattgggtcagcatcgatgggtaaccca
cactgcgtaatggaagtagacgatgttgatactgctaacgttgctgaaattggtccgctt
gttgagaaacacgagcgattccctgagggtgtaaacgtaggttttatgcaaattatcaat
gagtcacacattaaacttcgcgtatttgagcgtggctcgggcgagacattggcatgtggt
agcggtgcttgtgccgcagttgcaattggccaaattcagggtaaattaggaaaagacgtg
cgggtagacttacccggaggcactttacgtatacgctggcctggcccagataacgtgtta
aaaatgacagggcctgccgaacacgtatatgacggacatataaatctatga
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