Alteromonas macleodii Black Sea 11: AMBLS11_02635
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Entry
AMBLS11_02635 CDS
T02260
Name
(GenBank) sigma S (sigma 38) factor of RNA polymerase, major sigma factor during stationary phase
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
amk
Alteromonas macleodii Black Sea 11
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amk03021
]
AMBLS11_02635
Transcription machinery [BR:
amk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMBLS11_02635
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AFT77119
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Position
complement(610024..611016)
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AA seq
330 aa
AA seq
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MGKSNKALESKPQDDLDVIDMPADMKADETLINDAELENDDAIFSQDDQPKNLDATQLYL
GEIGFSPLLTAEEEVYFARRSLKGCEASRKRMIVSNLRLVVKIARRYNNRGLALLDLIEE
GNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAS
RELSQKLDHEPTAEEIALALDKPVEDVTKMLRLNERITSVDTPIGGENDKALLDIIADEK
EFSPEESLQDSDIKSNIVTWLEELNPKQREVLARRFGLMGYEPSTLEDVGAEIGLTRERV
RQIQVEALRRLRDMLGHQGLSLENLFDQMK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcaaataaagccttagaatcaaaaccgcaagatgacttagatgtcatcgat
atgccagctgatatgaaagctgacgagaccttaattaacgacgctgaactagaaaatgac
gatgccattttcagtcaggacgaccaacctaaaaacctagatgccacacagctttatcta
ggcgagattggtttttcaccactgctaaccgcagaagaagaagtttattttgcgcgccgc
tcactgaaaggctgcgaagcctctcgtaaacgtatgattgtaagcaaccttcgccttgtt
gttaaaattgctcgccgttataacaaccgtgggttggcacttctggatttaatcgaagaa
ggcaatttaggactaattcgtgccgtagagaagtttgatcctgaacgtggattccgcttt
tcaacatacgccacatggtggatacgccaaaccatcgaacgcgctatcatgaaccaaacg
cgcaccattcgtttgcctattcatgtagtgaaagaactgaacgtgtatttacgtgcttct
cgtgagctgtcacaaaagctggatcatgagccgaccgcagaagaaattgcactagcgctt
gataagcctgttgaagatgtcactaagatgttgcgtttaaacgagcgcattacctctgtc
gatacacctattggtggagaaaatgataaagcactcctcgacattattgctgacgagaaa
gagtttagccctgaagagagcttacaagactcagatattaaaagtaatattgtaacttgg
cttgaagaacttaaccctaaacagcgtgaagtacttgctcgtcgtttcggtcttatggga
tatgaaccttcaacacttgaggatgtgggtgccgaaattggcttaacacgtgaacgtgtt
cgtcaaattcaagtagaagcactgcgccgtcttcgcgatatgttgggtcatcagggtctt
tcgttagagaatttgttcgaccaaatgaagtag
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