Alteromonas macleodii Black Sea 11: AMBLS11_02770
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Entry
AMBLS11_02770 CDS
T02260
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
amk
Alteromonas macleodii Black Sea 11
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amk03021
]
AMBLS11_02770
Transcription machinery [BR:
amk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AMBLS11_02770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AFT77146
LinkDB
All DBs
Position
complement(641787..644660)
Genome browser
AA seq
957 aa
AA seq
DB search
MSSDSQFSVGQRWLSNTEIELGLGVVIGSDFRSVEVLYPATGEARKYTKQDAPLTRLIFE
IGETVKSQDGWEMTITEKEESQGLFIYHGLREDTKAQARLPETMLDSHIRLNQPEKRLFS
QQLDNPKWFDLRERALDYQYDYLRSSTIGLAGARISLIPHQLHIASEVGGRHAPRVLLAD
EVGLGKTIEAALIIHQQLKTGRAERVLILVPDSLMHQWLVEMLRRVNLPFAIYDESRCEA
IEKSEGLSEGFEDDETSDASAVNPFENDQLVLCSIDFLSKSEKRQQQIQAAGWDLMVVDE
AHHLAWSSEAPSAEYLCVEALANKTPGVLLLTATPDQLGHESHFARLRLLDPARFHSYDA
FLDEESKYSQLADAVAPLLSDAEPNDKQRSKLAEFAPDVMEHAGDLSSPENRHALLHQLI
DCHGTGRMLFRNRRANIEGFPMRKLSAYELALPEVYSDAVSGGDLTYSLYPERMASVVNS
WTKHDPRVEWLLDFMQSVKPEKILLICASARTAQELGEVIRTQTGIRHSVFHEGMSIVER
DKAAHYFADEEDGAQILLCSEIGSEGRNFQFAHHLVLFDLPITPDLLEQRIGRLDRIGQT
QTVQIHVPYMAKTAQHVLLDWYHEGLNAFEKTCPTGSGVFDDVKPLLIGACLHPDDMSAR
DELVNMSVTLNSQLVAQLEAGRDRLLELNASGEGRVEQLLEDIITLDSEQDLSRFMGRVF
DAIGVQQDEKGNDCFILMPTESMVSQLPGLDPEGMTVTYKRRIATTLENVQFLSWDHPLV
HTAIDVVLTDVHGKSSMGFIAEPSLPKGAYWIEALFVLQAQAPKSLQLGRFLPQTPVRVC
LDAQGNPSDLSFDVKRKIGRKISAQLLKALQQPLELAIEKARKLAHQQANQKQHDALNNM
HSTLNEEIQRLRDLQKRNPAVRDSEIEFIETQMNALDKVIQEADVQLDAIRIVVNNP
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagatagtcaattttcagttggtcagcgttggttaagcaacacagaaatagag
ttggggttaggtgtcgttatcggcagcgatttccgttcagtagaagtgctttatccagca
acgggagaagcgcgaaaatacactaaacaagacgccccgcttacgcgactaatttttgaa
attggcgagacggtcaaaagccaagacggctgggaaatgaccatcactgaaaaagaagaa
agccaagggcttttcatttatcacggacttcgcgaagacaccaaagcgcaagcccgatta
cctgaaaccatgctagacagccacatccgcttgaaccaacctgaaaagcgtttattcagt
cagcaactggacaacccaaagtggttcgacttacgcgaacgtgctctcgactatcaatac
gattatttacgctctagcactatcggccttgctggcgcacgtatctcacttatcccgcac
cagctgcacattgcatcagaggtaggcggtagacacgcacctcgcgttctgcttgccgat
gaagtaggccttggtaaaaccattgaagctgcgttaattattcaccagcaacttaaaaca
ggccgcgcagagcgcgtgcttattttggttccagactcgcttatgcaccaatggttggtt
gaaatgctacgccgggtgaaccttccttttgccatttacgacgaaagccgctgcgaagcg
atagagaagagtgaaggactaagcgaaggcttcgaagatgacgaaacgtctgatgcaagc
gctgtgaacccatttgaaaacgatcagctggtactttgcagtatcgactttctaagcaaa
agtgaaaaacgccagcagcaaattcaagctgcaggttgggacttaatggttgtcgatgaa
gcccaccaccttgcatggtcaagtgaagcgccatctgctgaatacctgtgtgttgaagcg
ttagccaataaaacacctggtgtattactgcttaccgcaacgcctgatcaacttggccac
gaaagccactttgcacgcttgcgcctgcttgacccggctcgcttccatagctacgacgct
ttcttagatgaagagtcgaaatacagccagcttgccgatgcggtagcgccattactttca
gacgccgagcctaacgacaaacagcgcagcaaacttgctgagttcgcgcctgacgtaatg
gaacatgcgggggacttaagttcaccagaaaatcgccacgcgctattgcatcaacttatc
gactgtcacggcaccggtcgtatgctgtttagaaaccgccgcgccaatatcgaaggcttt
ccgatgcgtaaattaagcgcttacgagctggctttacctgaggtttattcagatgcagtg
agcggcggcgacttaacctattcactgtatcctgaacgtatggcaagtgtggttaacagc
tggactaaacacgaccctcgcgttgaatggctgcttgatttcatgcaaagcgttaagcca
gaaaaaattctgcttatttgcgcaagtgcccgcacagcacaggagctgggtgaggttatt
cgcacgcaaaccggcattcgccacagcgtattccacgaaggcatgagcattgtcgagcgc
gacaaggcggcccattactttgccgatgaggaagacggcgcacaaattctattatgtagt
gaaataggtagtgaaggacgtaacttccagtttgcacaccacttggtgctgttcgattta
cctattacgccagacctgctggaacagcgcattggtcgtcttgaccgtattggacaaact
caaaccgtacaaattcacgtgccatatatggcgaaaaccgcgcagcacgtattgctagat
tggtatcacgaagggcttaatgccttcgagaaaacctgccctacgggctctggcgtgttc
gacgatgttaagcctttgcttattggtgcttgtttacaccctgacgatatgagcgcgcgt
gacgaactagtaaacatgagtgttacgctaaatagccagctcgtggcgcagcttgaagcc
ggtcgcgatcgtcttcttgagcttaatgcctcgggcgaaggccgcgtagagcaactgctt
gaagatattattacccttgatagcgagcaggatttgtcgcgctttatgggtcgcgtgttt
gatgcgatcggtgttcagcaggacgaaaaaggtaatgactgctttattcttatgccaaca
gaatcgatggtgagccagcttccagggcttgacccagaaggcatgacagtaacttacaaa
cgtcgtattgccacaacactagagaacgtgcagtttttaagttgggaccacccacttgta
catactgccattgacgtggtacttactgacgtacatggtaaaagcagcatgggctttatt
gccgagccgtctttaccgaagggcgcttactggatagaagcgctgttcgtactgcaagcc
caagcacctaaatcacttcaactaggtcgcttcttgccacaaaccccagtgcgagtttgt
ttagacgcgcaaggcaatccgtctgatttaagcttcgacgttaaacgtaaaattggtcgt
aagatctctgcgcaacttttaaaagcgttacaacagccccttgaacttgccattgagaag
gcgcgcaagcttgcccaccagcaggcgaatcaaaagcaacacgacgcgcttaacaatatg
catagcacgctcaacgaagaaatacagcgcctacgcgaccttcaaaagcgcaatccagct
gttcgcgacagcgaaattgagtttattgaaacccaaatgaatgcccttgataaagttatt
caagaggctgacgtgcagctggacgccattcgtattgtggtgaacaacccgtaa
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