Alteromonas macleodii Black Sea 11: AMBLS11_03965
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Entry
AMBLS11_03965 CDS
T02260
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
amk
Alteromonas macleodii Black Sea 11
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amk03400
]
AMBLS11_03965
DNA repair and recombination proteins [BR:
amk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMBLS11_03965
Archaeal homologous recombinant proteins
AMBLS11_03965
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AFT77383
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Position
930144..931691
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AA seq
515 aa
AA seq
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MKILHTSDWHLGQSFFTKSRKNEHAAFLKWLLQQVEAHQIDAIIVAGDVFDTGTPPSYAR
ELYHAFIGELQGMQCTLVVLGGNHDSVSVLNESKALLKYLNSHVIASTYGDLSEQVITLN
DRNGQPSAVLCAVPFIRPRDVLVSEAGQSGTDKRQALGDAIKQHYGALYNEALSLRASIE
EKQAEQGSKNSAAIPIIATGHLTALGVSQSESVRDIYIGTLEGFDAKGFPPADYVALGHI
HRPQKVAKTEHIRYSGSPIPLSFDELNTQKQVVLVTFESESTTPTISTLPVPRFQAMEVI
KGDLKAIEAAINESKAIALASHTDDAVSELDEVDKALSEVDKALSATDNAISPQEPVWLC
IEVETEDYLTDLQQRIQGLLEGKNAEILQLKRKRKRTVNSLTEKQNVQLSELSVNDVFEA
RLALESIEDNPTSEPVPSESVPSESAPTESAQGTLLDDDQSPRAMEEAGSEKSASRINRI
RQLFNEALERVHTNDEDAEVSVEAPLANTTENKGE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattgcatacgtctgactggcatttaggtcagagtttttttacgaaaagtcgc
aaaaatgaacatgccgctttccttaaatggcttcttcaacaagtagaagcgcatcaaatc
gatgcgattattgtcgcgggtgatgtgttcgacacaggcacgccgcctagctacgccaga
gagctttaccatgcgtttattggtgagctacagggcatgcagtgtacattggtggtgctg
gggggaaatcacgattcagtgtcggtattaaacgaaagtaaggcgctactgaagtactta
aatagccacgtaatagccagtacatacggcgatttaagtgaacaagtcattacgcttaac
gatcgcaatgggcagcccagtgccgtactgtgtgccgtaccctttattcgtccacgtgat
gtgcttgtcagtgaggcagggcaaagcggcactgacaagcgtcaagcactgggcgatgcg
ataaagcagcattatggggcgctttataatgaagccctgtcactgcgcgcttcaattgaa
gaaaaacaagcagaacagggcagtaaaaatagcgctgctattcctattattgctaccggg
cacttaaccgctttaggcgtgagtcagtcagaaagtgtgcgtgatatctacattggcacc
cttgaaggctttgacgccaaagggtttccgcccgccgattacgttgcacttgggcatatt
cacaggccacagaaagtggctaagacagaacacattcgctattcaggctcacccataccg
ctaagttttgatgagctaaacacgcaaaagcaagtagtgttggtaacgtttgaatctgaa
agcacaacgccaactatctcaacgcttcctgtaccgcgctttcaggcgatggaagtaata
aaaggcgacttaaaagctatagaggcggccattaatgaaagcaaggctatcgcgttagct
tctcacacagatgatgccgttagcgaattggatgaagtagataaagcccttagcgaagtg
gataaagcccttagcgcaacggataacgccattagtcctcaagagcccgtgtggctatgc
attgaggttgaaacagaagactatctgactgatctacagcagcgtattcagggcttgtta
gaagggaaaaacgctgagattttacagttgaaacgcaagcgtaagcgcacagtaaatagc
ttaacggaaaagcaaaacgttcagcttagtgaactatcagtaaacgatgtatttgaagcg
cgtttggcattggagagcatagaagataatccaacaagtgagccggtaccaagtgagtcg
gtaccaagtgagtcggcaccaactgagtcggcacaaggaaccctgctagatgacgaccaa
agcccccgagcaatggaagaagcaggttcagagaaaagcgcttcacgcataaatcggata
aggcagctgttcaatgaagcgctagagcgggtgcataccaatgatgaagatgctgaagta
tcagtagaggcaccattggcaaacacaacagaaaacaaaggcgagtaa
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