Alteromonas macleodii Black Sea 11: AMBLS11_04625
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Entry
AMBLS11_04625 CDS
T02260
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amk
Alteromonas macleodii Black Sea 11
Pathway
amk03030
DNA replication
amk03430
Mismatch repair
amk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMBLS11_04625
03430 Mismatch repair
AMBLS11_04625
03440 Homologous recombination
AMBLS11_04625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amk03032
]
AMBLS11_04625
03400 DNA repair and recombination proteins [BR:
amk03400
]
AMBLS11_04625
Enzymes [BR:
amk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMBLS11_04625
DNA replication proteins [BR:
amk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMBLS11_04625
DNA repair and recombination proteins [BR:
amk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMBLS11_04625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFT77513
LinkDB
All DBs
Position
1080805..1084269
Genome browser
AA seq
1154 aa
AA seq
DB search
MSSPFIHLRVHSDFSMMDGLNKVKPILGKVAALGMPAVAITDQMNMCGLVKFYSEAHNLG
IKPIIGTDFWVTNEVFGDEPFRLTLIAMNNEGYKNITILISKAYLRGHLAHRAVIDQEWL
AEHSEGVIVLSGAQHGDVGVGLMKNNAKILDSALEFYQTHFPDRFYLELIRTGRQGEEDY
LHLAVELAEQRDLPVVATNEVCFIDREGFDAHEIRVCIHDGYTLDDNRRPKRYSDQQYLR
TAEEMVELFSDIPEAIENTVEIAKRCNVTVRLNEYFLPQFPTGGMTTEDFLVKVSEEGLE
ERLEFLFPDEEVRKAKRPEYDDRLRIELEVINQMGFPGYFLIVMEFIQWSKDNGIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAEL
YGRQAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFKAEPQL
PEVYESDEEVKDLIDMARILEGVTRNAGKHAGGVVIAPTTITDFSPLYCDDEGKNPVTQF
DKNDVETAGLVKFDFLGLRTLTIIQWAIDMIKEGKNVDVDISAIPLEDPKSFRTLQNAET
TAVFQLESRGMKELIKRLKPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEISYPD
AEYQHECLKEILEPTYGIILYQEQVMQIAQEMAGYSLGGADLLRRAMGKKKPEEMAKQRG
TFAEGAKGNNIDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKVHYPAEFMAA
VMSADMDNTDKIVTLVDECERMGIEILPPDLNAGKYKFTVDSEGRIVYGIGAIKGVGEGP
IEAIIEARETQGAFKDLFDFCAKIDIKRVNKRVLEKLVLAGAMDNLGPHRASLMASLPEA
LAAAGQHAKAESFGQSDMFGLLTTEPEDVKQAFADVPEWPEKVWLEGEKDTLGLYLTGHP
INQYAEELRYYTDGRLVDLKPTNKDQMASAVGLVLGVRVMTNKRGRRWAIVTLDDKSARI
DVRFFPDMYEQFESVLETDRILLIKGQVSFDDFSGGNTITARDVMDIVQAREKNARALAL
NIDTQLLEPKKMSQMQSILQAFNGGSCPVQLAVTHPDAEVTLACGARWYVTPEDQLLHDL
KQCLGDKAVSILYH
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgccatttattcatttacgtgttcacagcgacttttcgatgatggacggcctg
aataaggttaagcctattctaggtaaagtggccgcgcttggcatgcctgccgtggcgatc
accgaccaaatgaatatgtgtggcttggtaaaattttattcagaagcacataacttaggt
ataaaacccatcattggtaccgatttttgggttaccaatgaagtctttggcgatgaacct
ttcagactaacccttattgccatgaacaatgagggatataagaacattacaattcttatc
tccaaggcctaccttcgtggacacttggcacaccgtgcggttatcgatcaagaatggtta
gcagagcatagtgaaggtgtgattgtgttgtcaggcgcacagcacggtgacgttggtgtg
ggtttaatgaaaaacaacgccaaaattctcgatagtgcccttgagttttatcaaacgcat
tttcctgaccgtttctatttagagcttattcgaaccggcagacagggtgaagaggattac
ttacaccttgccgttgagctagctgagcagcgtgatttacccgtggtagccaccaatgaa
gtgtgcttcatagaccgggaaggttttgatgctcacgaaattcgagtatgtattcacgat
ggctacacgcttgatgataaccgccgccctaaacgatacagcgaccagcaatatctacgc
actgctgaagaaatggttgagttatttagcgatattcctgaagccatagaaaatacggtt
gaaattgctaagcgctgtaacgttaccgtacggttaaacgagtacttcttaccgcaattt
ccaaccggcggcatgaccaccgaagacttcttggttaaggtgtctgaagaggggttggaa
gaacgtctagaatttctatttcccgatgaagaagtgcgcaaagcgaaacgtccagagtac
gatgaccgacttcgcattgagcttgaagttatcaaccaaatgggtttcccaggctacttc
cttattgtaatggagttcattcagtggagtaaggataacggaattccagtagggccaggg
cggggttctggtgcgggttcactggtggcttatgccctaaaaattaccgacctagacccg
cttgaattcgacttgctattcgaacgtttcttgaacccagagcgtgtatccatgcccgac
ttcgacgtcgacttctgtatggacagacgagatgaggtaatcgaccacgttgctgagctt
tacggacgtcaggcggtatcgcaaatcattacgtttggtactatggcagcaaaagcggta
gtgcgcgacgtaggccgcgtacttggtcacccatacggctttgtagacagaatctcaaag
ctgattccacctgaccctggtatgacgcttgaaaaggcgtttaaagcagagccacagcta
ccagaagtgtatgaaagcgatgaggaagtgaaagaccttatcgatatggcgcgaatactt
gaaggggttaccagaaacgctggtaaacacgccggtggtgttgttattgcgccaaccaca
atcacagatttctcgcctttgtattgtgatgacgaaggtaaaaaccccgtaacccagttc
gacaaaaacgacgttgaaacggcgggcttggtaaaattcgacttcttaggtcttcgtacg
ctgactattattcagtgggcaatagatatgatcaaagaagggaaaaacgttgatgtagat
atcagcgccattccgcttgaagatcctaagagtttcagaacccttcaaaacgccgagaca
actgcggtattccagctggaatctcgcggtatgaaggagctaattaagcgccttaaacct
gactgcttcgaagatattatcgcactggtggcccttttccgtccgggcccgctgcaatca
ggcatggtagataactttattgatcgtaagcacggacgtgaagaaatttcctaccccgat
gctgaatatcagcacgagtgcttgaaagaaattctagagcctacctatggcattatcttg
tatcaggaacaggtaatgcagatagcccaggaaatggcgggctactcgctgggcggcgct
gacttgcttcgtcgtgctatgggtaagaaaaagccagaagaaatggcgaagcagcgcggc
acgttcgccgaaggtgccaagggcaataatattgacccggaccttgcgatgaaaatcttc
gacttggtagaaaagttcgcaggttacgggtttaacaaatctcactctgccgcttatgca
ttggtgtcttaccaaactttgtggctgaaagtgcattatcctgcggaattcatggctgcg
gtaatgtcggcagatatggataacaccgataaaatcgtgacgcttgtcgatgaatgtgag
cgcatgggcatcgaaatactgccgccagatttaaatgcgggtaaatacaaatttaccgtc
gatagcgaaggtcgcattgtttacggtatcggtgcgattaaaggggtaggtgaaggcccg
attgaggcgattattgaagcgcgggagacccaaggggcatttaaagatctttttgatttc
tgcgccaagatagacattaaacgcgtaaacaaacgggtacttgaaaagctagtgttagcg
ggggcaatggacaacttaggtccgcatcgcgctagccttatggcgagtttacccgaagcc
cttgccgccgctggacagcacgcaaaagccgagtcttttggtcagtcagacatgttcggg
ttactgactaccgagccagaagacgtgaagcaagcgtttgctgacgtccctgaatggcct
gagaaagtatggctagaaggtgaaaaagataccttgggcttgtacttaaccggtcacccc
atcaatcagtacgcggaagaattgcgttattacaccgacgggcgtttagttgatttaaaa
ccaacgaacaaggaccaaatggccagcgcagtaggattggtgcttggtgtgcgtgttatg
acgaacaaacggggtcgtcgctgggccatagtgacactggatgataagagtgccagaata
gacgtacgtttcttccccgatatgtacgaacagttcgaaagtgtgttagaaactgacaga
atattgcttataaagggacaggtcagctttgatgatttctctgggggcaatacaatcacc
gcccgtgatgtaatggacattgttcaggcacgagagaaaaacgcgagagcgctggcactt
aatattgatacccagctgcttgaaccgaagaaaatgagtcagatgcaatctatcctgcag
gcatttaacggtggaagttgtcctgttcagttagcggtaacccatccagacgctgaagta
accttagcgtgtggtgcaagatggtacgttacccctgaagaccaacttttgcacgatctc
aaacaatgtttgggagacaaagccgtttcaattctctaccattaa
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