Alteromonas macleodii Black Sea 11: AMBLS11_05030
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Entry
AMBLS11_05030 CDS
T02260
Name
(GenBank) peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
amk
Alteromonas macleodii Black Sea 11
Brite
KEGG Orthology (KO) [BR:
amk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amk01002
]
AMBLS11_05030
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amk01011
]
AMBLS11_05030
Peptidases and inhibitors [BR:
amk01002
]
Cysteine peptidases
Family C82
AMBLS11_05030
Peptidoglycan biosynthesis and degradation proteins [BR:
amk01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AMBLS11_05030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Baculo_VP91_N
Motif
Other DBs
NCBI-ProteinID:
AFT77594
LinkDB
All DBs
Position
complement(1172742..1174349)
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AA seq
535 aa
AA seq
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MVVLQNHVATLFWVSLMVMLTFSHTANASKQPNLRQRVENLLVDAVDNYSPNNSNPSRVN
NRVLVSEVYTQNDYQLIWFGTSEAETRLQELLHEIADSELHGFSPEYYHAPILESRDANT
ALLDVLATDAFISQTLHRLNGLVSPANADAHWFLQQREADPVASLNHALTNGVSATLQAM
WPTHHEYQLLLDKKRSLLSAVSTVTTQIPAGPTLKLNSTSERVALLKSRLLGPGTYSELF
DKDLLDAVKQFQMSAGIEPDGIVGSSTLEALNATTFSWLERIDANLERWRWLPHQSWSTY
LRVNIASFQLRGFSDGEQTLDMPVIVGTPIRQTPVFTESMKYMVFNPYWTVPFSIATKDK
LAKLKTDPSVLVKQGYEAQPAGVSGFKPVDEFDWQNVTRGTFHYTLRQKPGPYNALGKVK
FMLPNKHAIYLHDTPDHSLFSKQERNFSSGCIRVSNPLALTQWVLNHSGQAEAIAQAEQL
LQSEETSTLYLKKPIPVLIVYFTAFANGEGTIVFRRDAYNRDSYIIEKLKEYKSA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggtagtactacaaaaccatgttgcaacgttgttttgggtcagtcttatggtcatgctg
acttttagtcacactgcaaacgcatctaaacagcctaatttacgacagcgagtcgaaaat
ttattggttgatgctgtagataattatagccctaataacagtaacccatcgcgtgtgaac
aatagagtcttggtaagcgaggtctacactcaaaacgactaccagcttatttggtttggc
actagcgaagcagaaacccgcctacaagagctactgcatgaaattgccgactccgaatta
cacggcttctctcctgaatattaccatgcccctattcttgaaagtcgagacgcaaatact
gcgcttctagatgttttagcaacagacgcctttatcagtcagaccctgcatcgattaaac
gggcttgtcagtcccgccaatgccgatgctcattggtttcttcagcaaagggaagcagac
cctgtagcttcacttaatcacgcattaacaaacggtgtttctgcaacattgcaggccatg
tggcctactcaccacgaataccagctattgctggataaaaaacgaagcctactgtcagct
gtatctacagttaccacacaaattccagctggccctacacttaagctgaactcaacgagc
gaacgagttgcgttgctaaagtctcgccttttagggccaggaacctattcagagttattc
gataaagatttactggacgcggttaagcagtttcaaatgtcggcgggcatagagccagat
ggtattgtgggaagttccactttagaagcattaaatgccaccacgttttcttggttagaa
agaatcgatgcaaacttagagcgttggcgctggcttccccaccaaagctggtcgacgtat
ctgcgtgttaatattgcttcatttcagttaagaggattttctgacggcgaacaaacactg
gatatgccagtgattgtaggtacaccgataagacaaacgcccgttttcactgaatctatg
aaatacatggtttttaatccttattggaccgtaccttttagtattgctaccaaagacaaa
cttgcaaaattaaaaaccgatccctccgtattagtaaaacaaggttatgaagctcagcct
gcgggtgtcagtggtttcaaacctgtcgatgaattcgattggcagaacgtaacgcgaggt
acattccattacacgctaagacagaagccgggcccatataatgccttaggtaaagtgaaa
tttatgctgcccaataagcatgcaatctatttgcacgatacccctgatcatagccttttt
tcaaagcaggaaagaaactttagttcaggctgtattagagtatctaacccccttgcgcta
actcagtgggtgcttaatcactcaggccaagctgaggcgatagcgcaagccgagcaattg
cttcaaagtgaagagactagcacgctgtatttaaagaaacctattcctgtacttattgta
tatttcactgcgtttgcgaatggagaagggaccattgtttttcgccgtgatgcatacaac
cgcgacagctacattattgaaaaattgaaggagtataagagtgcgtaa
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