KEGG   Alteromonas macleodii Black Sea 11: AMBLS11_07925
Entry
AMBLS11_07925     CDS       T02260                                 
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
amk  Alteromonas macleodii Black Sea 11
Pathway
amk03030  DNA replication
amk03430  Mismatch repair
amk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AMBLS11_07925
   03430 Mismatch repair
    AMBLS11_07925
   03440 Homologous recombination
    AMBLS11_07925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amk03032]
    AMBLS11_07925
   03400 DNA repair and recombination proteins [BR:amk03400]
    AMBLS11_07925
Enzymes [BR:amk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AMBLS11_07925
DNA replication proteins [BR:amk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AMBLS11_07925
DNA repair and recombination proteins [BR:amk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AMBLS11_07925
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA QueC
Other DBs
NCBI-ProteinID: AFT78166
LinkDB
Position
1876171..1877058
AA seq 295 aa
MQVLPWFAATFSTLLSRYLAKKLHHGLLLTGPKGIGKYQLALGLSSTLLCKQPSIDGPCE
QCQSCHLRQAGNHPDFHVLESEKQLGVDKIREGIAKLSGTAQMGGNKVLLIPRADTMTEA
AANALLKTLEEPTNNTFLLLITDSINKIMPTILSRCERQILSLPSVSESLNYLNAKGVED
ASEALLAAYGYAPLRVEEALSGEEDISYRNFSDGMQALLAGDANLQVQTLANKWQDNAQQ
IALWCQQMAHDEYMKRQQVVDFKRYEACVDAVKTLQHAGVNKSMVLFGLLKQFQR
NT seq 888 nt   +upstreamnt  +downstreamnt
atgcaagtactgccttggtttgctgcaacgttctcgacgttactgtcgcgctatttggca
aaaaaacttcaccacggtttactgctgacagggccgaaagggattggaaaataccaactc
gcgctagggttaagcagcacgttgttgtgtaagcaaccaagcatagatgggccctgtgaa
cagtgccaaagttgtcacctaaggcaagcaggaaaccacccagattttcatgtattggaa
agtgaaaagcagttaggggtggataaaattcgcgaaggcatagccaagctatcaggtact
gcgcaaatgggaggtaataaagtattgttgatccctcgtgccgataccatgacagaagct
gcggctaatgcactgttgaaaaccttggaagagcccacaaataataccttcttactgctg
attactgacagtatcaacaaaattatgccgaccatattaagtcgatgtgaacggcagata
ctatcgcttccatcagtatcagagagtttgaactacttaaacgccaagggcgtagaagat
gcaagcgaagcgttactggcagcttatggctatgcgccccttcgcgtggaagaagcgctc
agtggagaagaggacattagctatcgcaattttagcgacggcatgcaggcgctcttagca
ggcgatgcaaatttgcaagtgcaaacacttgctaacaagtggcaggacaatgcgcaacaa
atcgcattgtggtgccagcaaatggcccatgatgagtacatgaaacgtcaacaggttgtt
gactttaaacgctatgaagcgtgtgttgatgcagttaaaacccttcaacacgcaggcgtg
aacaaatcgatggtactctttgggctgctaaaacagtttcaacgataa

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